Xenorhabdus nematophila ATCC 19061: XNC1_1231
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Entry
XNC1_1231 CDS
T01274
Symbol
prpR
Name
(GenBank) transcriptional activator of propionate catabolism (EBP family)
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xne03000
]
XNC1_1231 (prpR)
Transcription factors [BR:
xne03000
]
Prokaryotic type
Helix-turn-helix
Other families
XNC1_1231 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_2
HTH_psq
Xre-like-HTH
HTH_23
RWP-RK
HTH_17
HTH_Tnp_ISL3
HTH_1
HTH_11
HTH_30
HTH_50
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CBJ89302
UniProt:
D3V9R4
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All DBs
Position
1096035..1097693
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AA seq
552 aa
AA seq
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MALIHAGERNRNKPVIWTVSISRLFDLFRAITPEFDHQAEITPIQLGFEQAIKHIRQRLE
TEHCDAVICAGSNGAYLKSRLSVPVIMAKASGFDFMQALARARQISSRIGVINYQNTLPV
LEEFQQRFNLRIEQRSYVTAEDARTQVNALKAMGIKVIVGAGLITDLAYAAGLVGVFIYS
ADSIRQAFQDALEMARMAKLNQPVISPYPMENKLRTRHTISDIRGNSATIEHVRNTIMLY
ARSMATVLIQGESGTGKELVAQSIHHEYTLRYGLLAGKHSRPFVAVNCGAIAESLLEAEL
FGYEEGAFTGSRRGGRAGLFEVAHRGTLFLDEIGEMPLPLQTRLLRVLEEKSVVRVGGYR
PIEVDVRIICATHCDLDTWVREGRFRADLFYRLSVLRINVPALRERGSDIGLLALEYLQR
ALAVLNLSVSLSRRRELAACHGALQSYHWPGNVRELRNLMERIALYLSANPEQVLTPALI
LSLSPERQIDITAGSKSMKAAQFVEPVSLIESASSAHDIVARFSGNRRAAAEYLGISRTT
LWRRLKQEKREN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcattaattcatgcgggggaacgtaataggaataagcctgtgatttggaccgtttcc
atttccaggttgtttgatctttttcgtgctattacgccagaatttgatcatcaggctgaa
attacaccgattcagctgggttttgagcaggcaattaaacatattcgtcaacgtctggaa
acagagcattgtgacgccgttatttgtgcgggttctaatggtgcttatttaaaaagccgt
ttgtctgttcccgtgattatggctaaggccagtggatttgatttcatgcaggcattggcg
cgtgcccggcaaatcagctcccgcattggtgtcattaactaccagaataccttgcctgta
ttggaagagtttcagcaacgtttcaaccttcggattgaacaacgaagttatgtaacggca
gaagatgccagaacgcaggtaaatgcgttgaaggcaatgggtatcaaggtcatcgtggga
gcggggctgattaccgatcttgcttatgcagcagggctggtgggggtttttatctattct
gctgattccatccgacaggcatttcaggatgcactggagatggccagaatggctaaactc
aatcagccggtcatttcgccttatcctatggagaataaattacgtacccgccatacgatc
agcgatatcagggggaactctgccacgatagaacacgtgcgtaataccatcatgctgtat
gcccgttcaatggcaacggtgctgattcagggcgaaagcggtacgggaaaagagctggtg
gctcagtccatccaccacgaatacactttgcgttatgggttgttagcaggtaagcattcc
cggccttttgttgccgttaactgtggtgctattgccgagtctttgctggaagccgaatta
tttggctacgaagaaggggcatttaccggatcgcggcgcggtggacgtgcgggcttgttt
gaagttgctcacaggggaaccttgtttctggatgaaattggcgaaatgccgttaccgctg
caaacccgattattgcgggtactggaggaaaaatcggttgtcagggtcggaggatatcgt
ccgattgaggttgatgtccgcattatctgtgcgactcattgcgatttagatacatgggtg
cgggaagggcgtttccgtgcagatttgttctatcgtttgagtgtattgcggatcaatgta
cccgccttgcgggagagagggagtgatattggtttactggcgctggaatacctgcaacgt
gcattggctgtgctcaatttatctgtttcattatcaagaagaagagaacttgctgcctgt
catggcgcactacaatcttatcattggccgggaaatgtgcgtgaactgcgtaatttaatg
gagcggatagcactttacttaagtgctaaccctgaacaggttttgacgcctgcattaata
ttatcgctttcacctgagcgccagattgatattactgctggcagtaagagcatgaaagcc
gcccagttcgttgaaccggtttcactgattgaaagtgcgtcttcggcacatgatattgtg
gcacgattctcaggtaatcggcgtgcggcagcggaatatttgggtatcagccgcacgacg
ttgtggcgaagattaaaacaggaaaagagagaaaattaa
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