Xenorhabdus nematophila ATCC 19061: XNC1_1250
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Entry
XNC1_1250 CDS
T01274
Symbol
dinB
Name
(GenBank) DNA polymerase IV, devoid of proofreading, damage-inducible protein P
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xne03400
]
XNC1_1250 (dinB)
Enzymes [BR:
xne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XNC1_1250 (dinB)
DNA repair and recombination proteins [BR:
xne03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
XNC1_1250 (dinB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
HHH_5
DNA_pol_lambd_f
RecR_HhH
HHH
Cdd1
Motif
Other DBs
NCBI-ProteinID:
CBJ89321
UniProt:
D3V9T3
LinkDB
All DBs
Position
1113426..1114481
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AA seq
351 aa
AA seq
DB search
MRKIIHIDMDCFFAAIEMRDNPSLRNIPIAVGGSADRRGVISTANYRARYFGVHSAMSTA
VALKLCPQLKVIPGRMAIYKEVSQHIRQIFSRYTELIEPLSLDEAYLDVTDCRYCHGSAT
LIAREIRQVIFNELELTASAGIAPVRFLAKIASDINKPNGQYVISPEHVDTFVKSLSLRK
IPGVGKVTAKRLSDSGLETCFDVQKYDKLALIKNFGKFGLALWQRCHGIDERQISSERLR
KSVGVEKTLAQDIHEWSECIELIEKLYPELEKRLAKVKPDLRIARQGIKLKFDDFQLTTQ
EHIHPLLDKSDLMKVAKQAWDTRREGRGVRLVGLHVTLQSPQLERQLLLEW
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaattattcatattgatatggactgcttttttgctgccattgaaatgcgggat
aatccatcactccgtaatatccctattgccgtaggcggaagtgctgataggcgaggtgtg
atcagtacagcaaattatcgtgcgcgctattttggtgtgcatagtgcaatgtctactgcg
gtggctttaaaactgtgcccccaattgaaagtcattccggggcgaatggcgatttataaa
gaagtctctcagcatattcgccaaattttttcccgttacactgaactgattgaacccctt
tctctggatgaagcttatcttgatgtaacggattgtcgttattgtcatggctctgcaacc
ttgattgcccgagagatacgtcaggtgatttttaatgaattagagttaacggcttccgct
gggattgcgccggtgaggtttttagccaagattgcgtctgatatcaataagcccaacggt
caatatgttatctcgcctgaacatgtagacacttttgttaagtcgttatcgttacgcaaa
attcccggcgtaggtaaagtcaccgctaagcgtttgtcagattcagggttggaaacctgt
tttgatgttcagaaatacgataagttggcgttaataaaaaattttggcaaatttggcctg
gcactttggcaacgctgccacggtattgatgagcgacaaatttcatctgagcgtttgcga
aaatcggtaggggtagaaaaaacgctggcgcaagatatccatgaatggagtgaatgtatt
gagttgattgaaaaactttatcccgaattggaaaaacggttagcaaaagtaaaacctgat
ctccgtattgctcgtcaggggattaaattgaaatttgatgattttcaattaacaacccag
gaacatattcatcctttgctggataagtctgatctgatgaaagtcgcaaaacaggcctgg
gatacgcgacgggagggacgaggtgtcaggctagtcgggttacatgtcacattacaaagc
ccacaattggaacgacagcttttactggagtggtaa
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