Xenorhabdus nematophila ATCC 19061: XNC1_1296
Help
Entry
XNC1_1296 CDS
T01274
Symbol
yfiF
Name
(GenBank) putative tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xne03009
]
XNC1_1296 (yfiF)
03016 Transfer RNA biogenesis [BR:
xne03016
]
XNC1_1296 (yfiF)
Ribosome biogenesis [BR:
xne03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XNC1_1296 (yfiF)
Transfer RNA biogenesis [BR:
xne03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
XNC1_1296 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
BTRD1
Motif
Other DBs
NCBI-ProteinID:
CBJ89361
UniProt:
D3V9X3
LinkDB
All DBs
Position
1161858..1162931
Genome browser
AA seq
357 aa
AA seq
DB search
MNDSYSGKNGKVKVMYVRNEDSNDSRRDNDRDRNNGRGRNNDRRRNSDSYKDDKRSFGKG
RDQGDRRRDSDRPARSGDRSPWRTVSRPEEESLKPDHGGISGKSYIDPEQLRRQRLEETR
IYGENACLAMFQNRPDAIVRAWFVQSVTPRFRNALKWMAANRKAYHVVDDQELAKASGTE
HHGGVCFLIKKRNGLGVETYLQQAPAKDCVLALENVGNPHNLGAIMRSCAHFGVQGVVLQ
DTAMLESGAAVRTAEGGAEHIKGIDADGFTDTLNKFRNEGYTIVTTSSHKGSTALAQATL
PEKMVLVLGQESDGLSDSIWEDGDIRLSIGGTGRVESLNVSVATGILLAEWWRQNKV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcctatagtggtaaaaacggtaaagtcaaagtgatgtatgtccgcaacgag
gacagcaacgatagtcgtagagacaatgaccgtgatagaaataatggtcgtggtagaaac
aacgaccgccgcagaaacagtgacagctataaagacgataagcgctcatttggtaaaggg
cgtgatcagggtgaccgccgtcgtgatagtgatcgcccggcgcgttcaggtgatcgttct
ccctggagaactgtttcccgtcccgaggaagaatctcttaaaccagatcacggtggcatc
agcggtaaaagttatatcgatcctgaacaactgcgccgccagcgtctggaagaaactcgt
atttatggggaaaatgcttgtctggcgatgttccaaaaccgcccggatgcgattgttcga
gcgtggtttgttcaatccgttactccacgtttccgcaatgcgttaaaatggatggcggca
aatcgcaaagcttaccatgtggttgatgatcaagaattggctaaagcatcaggtacagaa
catcatggtggcgtatgctttttgattaagaaacgcaatggcttgggtgtagaaacctat
ttacagcaagcgccggcaaaagattgtgttctggcgttggaaaatgtagggaacccacat
aatcttggggcaattatgcgtagttgtgcgcattttggcgtacaaggtgttgttttgcag
gatactgcaatgcttgagtcaggtgctgctgttcgcactgctgaagggggcgcagaacat
atcaaaggcattgatgctgatggtttcacggatacgctgaataaattccgcaatgaaggt
tacaccattgtgaccacatcaagccacaaggggagtacagcactggcacaagcaacattg
ccagaaaaaatggtcttggtgttagggcaagagagtgatggtttaagtgacagcatttgg
gaagatggggatattcgtctttcaattggcggtacaggtcgggttgaaagcctgaatgtt
tctgttgctacaggtattctgctggcagaatggtggcgtcaaaataaagtttaa
DBGET
integrated database retrieval system
