Xenorhabdus nematophila ATCC 19061: XNC1_1376
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Entry
XNC1_1376 CDS
T01274
Name
(GenBank) ABC transporter RTX toxin
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XNC1_1376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xne02000
]
XNC1_1376
02044 Secretion system [BR:
xne02044
]
XNC1_1376
Transporters [BR:
xne02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XNC1_1376
Secretion system [BR:
xne02044
]
Type I secretion system
RTX toxin transporter
XNC1_1376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
AAA_16
AAA_18
AAA_21
AAA_29
PRK
AAA_28
AAA_25
CoaE
AAA_30
RsgA_GTPase
nSTAND3
Rad17
MeaB
Tmemb_9
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
CBJ89439
UniProt:
D3VAK3
LinkDB
All DBs
Position
complement(1234148..1236277)
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AA seq
709 aa
AA seq
DB search
MTDNFSFTSDEELSLENYALDCIAYLGKQFHKVASVEQLQHTLGLDSLVLTDPQLREAAD
ALELHSKLDRLTAKTAATVHLPALIELDQRWWVLSDVHPDRLTVFDPTTGKHETHHLPGE
YEYKILLVVDKSLTRQQVKFGLSWFYPSILRQKSQLRDIFLFAIVLQLFALAAPLLFENV
IDKVLVGRSISSLHVIGMAMLALALAEPLYSFLRNTVFGHMASQINSELSGRLYRHLVGL
PLPYFKQRQTGQIIARVREMAHIRQFLTGSTLMLLLDLIFIILFLGVMFHYSSLLTWIVI
SSLVLYFLLWITVGPIIRRKVEKEYESDADATSFLTEAVTGIETIKTTATEKRFLYQWQR
VLSQQLIQRFTTQKSGLAAGQGIALIQKVIAALLLWWGVRSVLNGDLSPGELIAFNMLAG
HVTQPILRLAQVWQDFQHTLIALRRVGDILDEPMEHSKQGLASAPELAGQIEFNNIRFRY
HADTPEVLANLSLSIKAGEFIGITGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIAD
PVALRRNMSVVLQESILFSGSIADNIRLCKPNASDEEVYRAAALAGATDFIDAFPHKFAH
PVGEKGNNLSGGQRQRIALARALLNDPKILILDEATSALDYESEAAIMSNMDEICRNRTV
ISIAHRLNTLRYANKIFVLDQGKVVGADSHDALVQQGGLYAQLWEQQTK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaatttttcctttacgagtgatgaagagctctctttggaaaactatgccctg
gattgtattgcctatttaggcaaacaatttcacaaagtcgcttctgtcgaacaacttcag
cacactctggggctggattcccttgtgctgacagatccgcaactgcgtgaagccgctgat
gcccttgagttgcacagtaaattagatagattaaccgcgaaaacggcggcgacagtgcat
ttaccggcgttaattgaattggatcaacgctggtgggtattgtcagatgtccatcctgac
agattgactgtatttgatcccacaaccggaaaacacgaaacccatcacctaccgggcgaa
tatgaatataaaatactgctggtggtagataaatcactgaccagacaacaggttaaattt
ggcctgagctggttttatccttccattctcagacagaaaagccagttgcgggatattttc
ctgtttgccattgtgttgcagcttttcgcactggcagcacctttgttgtttgaaaatgtg
attgataaagtgctggtaggacggagtatctccagcttacatgtcatcggcatggcaatg
ctggcattggctctggcagagcctttatatagttttctgcgcaatactgtgttcgggcat
atggccagccaaatcaactctgaactttcaggcagactttatcgccatttagtgggatta
cctctgccctattttaagcaacgccaaacagggcaaattattgccagagtcagagaaatg
gcgcatatccgccaatttttgaccggttctaccttgatgctgttgcttgacctgattttc
atcattctgtttctgggcgtcatgtttcattattcctccctgctgacatggattgtgata
agttcgctggtactctatttcttgctgtggatcaccgttgggccaatcattcggcgcaaa
gtagaaaaagagtatgaatcggatgccgatgccaccagtttcctgacagaagctgtcacg
ggtattgaaaccatcaaaaccacggcaacggaaaaacgttttttgtatcaatggcaaagg
gtattgagccaacagttaatccaacgttttaccacccagaaaagcgggctggctgccgga
caagggatcgcactgatccagaaagttatcgcggcattgcttctgtggtggggagtccga
agtgttctcaatggggatttgtctccgggtgaattgattgccttcaatatgctggcagga
cacgttactcagccgatcctgagattggcccaagtctggcaagattttcagcatacactg
atcgccttgcgacgggttggcgatattcttgatgaaccgatggaacacagtaaacagggg
ctggcatcagcgcccgagctggccggtcagattgaattcaacaatattcgcttccgctat
catgcagatacgcctgaagtgctggcaaacctgtcattaagcattaaggcaggagagttt
atcggtatcactgggccatcaggttcaggaaaaagtacactgacccgattattacagcgc
ctgtatgtgccacaacatggtcaggttctggtggatggcatggatttggcgattgctgat
cccgttgcactgcggcgaaatatgagtgtcgttttgcaggagagcattctgttttccggc
agcattgcggataatatccgcctgtgtaaacccaatgccagtgatgaagaagtctatcgg
gccgcagccttagcgggagcaactgacttcatcgacgcctttccccataaattcgcccat
cctgtcggcgaaaaaggcaataatctttccggcggacagcgccaacgcattgcactggca
agggcattgctaaatgatcccaaaattctgatcctcgatgaagcgacttccgcactggat
tatgaatctgaggccgccataatgagcaatatggatgaaatatgccgcaaccggacggtg
attagcatcgcccatcggctgaatactctgcgctacgctaacaaaatttttgttttggat
cagggaaaagtcgttggggctgattcacacgatgcccttgtgcaacaagggggtttatat
gcccaactttgggagcagcaaacaaagtga
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