Xenorhabdus nematophila ATCC 19061: XNC1_1675
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Entry
XNC1_1675 CDS
T01274
Symbol
fliA
Name
(GenBank) sigma F (sigma 28) factor of RNA polymerase, transcription of late flagellar genes (class 3a and 3b operons)
KO
K02405
RNA polymerase sigma factor FliA
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne02020
Two-component system
xne02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XNC1_1675 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XNC1_1675 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xne03021
]
XNC1_1675 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xne02035
]
XNC1_1675 (fliA)
Transcription machinery [BR:
xne03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XNC1_1675 (fliA)
Bacterial motility proteins [BR:
xne02035
]
Flagellar system
Flagellar assembly proteins
Stator
XNC1_1675 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
Tweety
TFIIE_alpha
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
CBJ89735
UniProt:
D3VC82
LinkDB
All DBs
Position
complement(1552533..1553255)
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AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERFD
SMQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVTQTIRKLEQELGRPASEQEV
AKELKINLIEYRQILLDTNNSQLFSYDEWHEIHGESCEPVIEEEHETNPLQQLLEGDLRQ
RVINIIESLPEREKMVLTLYYQEELNLKEIGAVLNVGESRVSQLHSQAIKRLRARLNPEK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatttgtataccgccgaaggcgtgatggacaaaaatagcctctggaagcgctat
gtaccactagttcgccatgaagcattgaggctacaggtaaggttgcctgccagcgtagaa
ctcgatgacttgcttcaggctggtggcataggcttgctgaacgcggtggagcggttcgat
tccatgcagggaaccgcttttaccacctatgcggtacagcgcatcagaggtgcaatgttg
gatgagttgaggagccgtgattgggctccgcgtagtgtgcggcgtaacgcacgggaagtc
acgcaaaccatccgtaaacttgagcaagagttagggcgtccagccagtgagcaggaagtt
gctaaagaattaaagattaatctgatagaatatcggcaaatactgttagacacaaataac
agtcaactgttttcttatgacgaatggcacgaaattcacggtgaaagttgtgagccagtg
attgaggaagaacatgaaaccaatcctcttcaacaactattggaaggtgatcttcgtcag
cgggtaatcaatatcattgagtcattgcctgaacgggaaaagatggttcttacgctgtac
tatcaggaagagctcaatcttaaagagatcggtgccgtgcttaacgtgggagaatcccgt
gtcagccagcttcatagccaggcgataaaaaggctgagggcgcgtctgaatccagagaag
taa
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integrated database retrieval system
