Xenorhabdus nematophila ATCC 19061: XNC1_1746
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Entry
XNC1_1746 CDS
T01274
Name
(GenBank) putative UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne03420
Nucleotide excision repair
xne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XNC1_1746
03430 Mismatch repair
XNC1_1746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xne03400
]
XNC1_1746
Enzymes [BR:
xne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XNC1_1746
DNA repair and recombination proteins [BR:
xne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XNC1_1746
MMR (mismatch excision repair)
Other MMR factors
XNC1_1746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
CBJ89806
UniProt:
D3VCU0
LinkDB
All DBs
Position
complement(1646512..1648407)
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AA seq
631 aa
AA seq
DB search
MLNLSKGQEAVVHAEIGLPMQVLAAAGSGKTRVLTERVRYLIENTRKDGIIALTFSNKAA
EEMQIRLADLDVLSERCWIATIHAVAQRILDQYGHTIGLPSELHIYERDLDRKTVFLQSL
RESGIGIDDFLNAGDEKTRKNRERIIHNYLEQFSVVKRELLTEEEIKEKYTSNESFLSVF
QAYQGALVRSGGLDFDDILVYAHRILMEQPWCANIYRAKYKHICVDEAQDLNKAQYEFIK
VLCGDQIKSVMMVGDPNQMIYGFNGSSSDYLCKLFLQDFSAQVFELKENYRSSKAVISLA
NKLKPGSQVEADFVLDGQYEIHKCQNEEDEATWICNKVNELLCQKTNIEIEGDISLTNMV
VIARNRFVFLKLEKGLGEKGIPYLLKKSERQAEPSSLFGRVLDLAIRVRLNPKDWIDGKK
LCTALKISVPSVWGNDNLLLDMAAAVRHSAISFPDIQADLLEEIQGLDIEKPNIPKLYDR
FNTIIQGLNDVNLPKEDNELERSLQELDDFRNCWTTFKRKGLGESLMSFRNAIALGQVAE
NYDPTGLTLSTIHTMKGLEKDIVFLMGMCEGVFPDYRANTKKELEEELNSAFVAITRAKR
WIFVSYPLQRVMPWGSLKSQTVSRFVTMLQK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatttatctaagggtcaagaggccgtagtccacgctgagatcggtctgcctatg
caggtacttgcagcagcgggatctggtaaaactagagtgctaactgaacgtgtacgttat
ttaatcgaaaacacacgcaaagatggtatcatcgcgttgacattttccaataaagcagcc
gaagaaatgcaaattcgtttagctgacctagatgtgcttagcgaacgatgctggatagct
acaattcatgctgtagctcagcggattttagatcaatatggtcatactattggcttacct
tctgaactgcatatttatgaacgcgatttagatcgaaaaactgtttttcttcaatcttta
agagaaagtggcattggtattgatgatttccttaatgctggagatgaaaaaacgcgaaaa
aatcgtgagcgtattattcataattacttagaacaattctcagtagttaaacgagaactt
ttaacagaagaggaaataaaagaaaaatatacttctaatgagtcatttttaagtgttttt
caagcataccaaggtgccttagtgagaagtggtggcttagattttgatgatattttagtt
tacgcccatagaattttgatggagcagccatggtgcgctaatatttatagagctaaatat
aaacatatatgtgtcgatgaggcacaagacttaaacaaagctcagtatgaatttatcaaa
gtgttgtgtggagaccaaattaagagtgtaatgatggtaggtgatcccaatcaaatgatt
tatggattcaatggttcatcgtccgattacttatgcaaattatttttacaggatttttct
gctcaggttttcgaactgaaagaaaattatcgcagctcaaaggcggtaattagtttagct
aataaattgaagccaggatcacaagtagaagctgattttgtattagatggacaatatgaa
attcataaatgccaaaatgaagaggacgaagctacttggatttgtaataaggtgaatgaa
cttctttgtcagaaaacaaatattgaaattgaaggcgatatatcgcttaccaatatggtt
gtgattgcccgaaatcgattcgttttccttaagctagagaaggggcttggtgaaaaaggc
attccatacttgttgaagaaaagtgagcgtcaagcagaaccatcatctttatttggtagg
gtgcttgatcttgcaatacgagttcgtcttaatccaaaagattggattgacggtaaaaaa
ctttgtactgctctgaagatatcagttccctctgtctggggtaacgataatttattactt
gatatggctgccgccgttcgccactcagcgatttcattccctgatattcaagctgacctt
cttgaggaaattcaaggattagacattgaaaagccaaacatacccaaactatatgatcgt
tttaatacaattattcaaggattgaatgatgttaatttgcctaaagaagacaatgagctt
gagcgttccttgcaagaactagatgacttcaggaattgctggactaccttcaaaaggaag
ggattaggtgaatccctcatgtcctttcgtaatgcgattgcattggggcaggttgcagaa
aactatgatccaactggtctaacattaagtacaatccacacaatgaaagggcttgagaaa
gatatcgtttttctcatgggtatgtgtgaaggagtatttccagattatcgagctaatacc
aagaaagaacttgaagaagagcttaatagcgcttttgtagctattacacgcgctaaacgc
tggatatttgtctcttatccgcttcaaagagttatgccatggggaagtttaaaatcacag
accgtttcacggtttgtaacgatgttgcaaaaatga
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