Xenorhabdus nematophila ATCC 19061: XNC1_1780
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Entry
XNC1_1780 CDS
T01274
Name
(GenBank) putative Nematicidal protein 2
Organism
xne
Xenorhabdus nematophila ATCC 19061
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tox-HDC
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
CBJ89840
UniProt:
D3VCX4
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All DBs
Position
1716790..1721754
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AA seq
1654 aa
AA seq
DB search
MNRDNDSNFFTQAGSFTSAISGGVDPRTGLYNLSITLGHINGNNQMGPQFPITLSYSPQS
QGNMGFGTGVSLGVSTYDTSSGRLSLSTGEQYQTDENTSSVTVKQKKLDNFKFEKHGGES
YRVTHKTGDVEILRGEDYGSSLKLPVRMINAAGHSLSLATDNNNRLISVSDESSPLLWVA
YDDRVTLTFYPGTQEKYSVILQTNNDLLTTITRRTTGEPDLVWHIQYEDTGFWGQWATAM
TSPSGLQDTVIYRCDGYTHRFPDSAPQSLRNNPMPYVTKRTLAPGAGQPIQVSVYSYSDY
NYLGYDSGVDWEATQDNLYNCLDNYIYSSVETQGVGIASKTITREYNSYHLQVSEETSSG
SNSVLKTTEYYAKLGTPFENQPEQFQLPRTITTMWSEGSTGLKRTETVITAFNESGNPVS
QTDADGTVTQWEYYPANGSDTDCPPEPNGFTRFMKSETVTPRKTAYSTPAHKTAYTYATF
EHASTDVSALVMKATEKHFADDVLLKTISCQYGTKAANTAGVMTKKTTTYPDPTDNKREY
TTTETVDFTDPGVNGNNIDAWVSAYTLTSHDGLTVTRSRTVSCMTGRLLESTDNKGNVTA
YTYNSLGWLTKRVHVKDTAYEHTTTYEYTVDATSGVFYATTTDPSGNKVRHGLDGMGRLL
HIKKNDVDMDSKNSEPEFLMQQQTRDALGRSLTGSTHDYQQAANKNNPTQTVTQTQRYDN
WGLVSESVSSEGVTTYTETVLVLPPTGTNCIWQLRSWQSGGTDTSGITVTTLDDNHNSVK
TELYPKNAQVGKNTPYSVTYSEYDGWNQLRSQTDELGQTTTYKYDDWGRPTITTLPDNTQ
THRAYVAFSSAKLPVSISVLDSNNIPVPGVGGTQTFDGLGRLKSTIIGGRHARYSYQFAY
QRHPTVIYNEAGNQEVYTYINALGEAPESLRASGVDINVSQDWTYNPVTAAMMTATEDKD
TENQHSLRYGYATSGQQTSVTVEKEGDIKEKSTNLMARTIGGTATTVRDYAGGTQTLTLD
ILGRATALDDADVSSTLTYDGLGQVTQWTVTSKKNHYTKTTTLTLDEYGRETQRTIETWD
ARNTLKDTLTVVQVWSKKHQVTHRTTTQTTAGKTVTLRDESYDFAPERGWLMRYTVSGST
PPQDETGKALSRQDFTYDSVTSNMTTKSVTYTDDTTTFTMYLFENKDDQCQLTGIRTDTG
TTTSLKYDDAGRLTQDEYGRMLSYDALGRLCKVTLNGSTLTRYRYDAGNQLSGQTVGDTT
TRYYYGNSTLAYMEDDATPKNAALLTPHAQVRTGKNAGIWLTSSDMAESVLSVTDGTTQE
NYAYTPYGARNGASSNDEAIAVTGYNGERLDGTLNQYHLGNGYRAYNPVLQRFTCPDSLS
PFGDGGINPYIYCEGDPVNRTDPTGHLFTEIALAARAAWKAIRDSVLVRKVTDAAGGIWH
NGKTMTDSLFGKRPPKNSLGRSFRDGDTAAGSRKEPRLQKEVDYKVTEASRSPMFKFNDN
IRKNPEQLWSLHEDNGKYIYNSHTKVNGYGVEKAYVNLKKISNKPIDIISGSHGGNLGEG
NWVEIFGPNAKREGVIRNPSYLEHKFLMQDLATLKKNKGLTDRVYNIKNLDRNELNNILR
NPNTNVILGYCYSANDNYMASVDNRISSLIFGWR
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagacaatgacagtaattttttcacccaggctggtagtttcaccagcgccatc
agcggcggggtggacccgcgcactgggttgtataacctcagcatcacgctggggcatatc
aacggcaataaccagatgggaccacagtttcccatcaccctcagctacagcccccagtcg
cagggcaacatgggctttggtacaggagtctccctaggggtatccacctatgacacgtct
tccggacgcctgtccctctccaccggagagcaatatcagacagatgaaaatacctcttcc
gtgacggttaagcagaaaaaactcgacaactttaaatttgaaaaacacggcggtgaatcc
tacagagtaacccacaaaaccggcgatgttgaaattctccgtggggaggactatggctct
tccttgaagcttccggtgcggatgattaacgccgctggtcattcattatctctggcaaca
gataacaataaccgcctgatttctgtcagtgatgagagtagccccctcctctgggtggcg
tatgatgaccgcgtaaccctgaccttttaccccggtacgcaggagaaatacagtgtaatt
ttgcaaaccaataatgacctgttgacaaccatcacccgtcgcactaccggagaaccggac
ctggtgtggcatattcagtatgaggatacggggttctggggacagtgggccaccgccatg
acttcaccttcgggcctgcaggataccgtcatttaccgttgtgatgggtatacccaccgt
ttcccggattcggccccacaatccctgcggaataaccccatgccgtacgtcacaaagcgc
acactggctcccggggccgggcaacctatacaggtatcggtgtactcatactcggattac
aattatctgggctatgactccggcgttgactgggaggcgacgcaggacaacctgtacaac
tgtctggacaattacatttattcatcagtagaaacccaaggtgtaggtatagccagtaaa
actattacccgtgaatacaacagttatcatctacaggtgagtgaagaaacaagttcaggt
tctaattctgttttgaaaacaacggagtattacgccaaactcggaacgcccttcgaaaat
caacctgaacagtttcagttgccgagaacaatcaccacaatgtggtcagagggtagtacc
gggctgaagcgtaccgaaacggttatcactgcatttaatgagtctggtaacccggtatcc
caaaccgatgcggacggcacagtgacgcaatgggaatactatccggcgaatggcagcgat
actgactgtccgcctgaacccaatggttttacccgttttatgaaaagcgagacggtgacg
ccccgcaagaccgcgtacagcacgccggcgcataaaaccgcgtatacctatgcaacattt
gagcatgcaagtacagatgtcagcgccctggtgatgaaagccacggaaaagcactttgct
gatgatgtgctcctgaagaccatctcctgtcagtacggcacgaaggccgcaaacaccgca
ggcgtaatgacgaaaaaaacgacgacttaccccgacccgaccgacaacaagcgggagtat
acgacgaccgagaccgtggatttcaccgacccgggcgtcaacgggaataatatcgatgcg
tgggtttccgcttacaccctgaccagccatgacggtctcaccgtgacccgttcgagaacg
gtatcgtgcatgacaggacgcctgctggagagtaccgacaataaggggaacgtcacggcg
tacacgtacaactcgctggggtggctgacaaagcgtgtgcacgtcaaggacacggcgtat
gaacataccaccacctacgagtataccgtcgatgcgacctccggggtgttttatgccacc
accaccgacccgtccggcaacaaggtgcgccacggcttggacggcatgggacgtctgctc
cacataaagaaaaatgacgtggatatggacagtaaaaattccgagcctgaattcctgatg
cagcagcagacccgggatgcgctggggcgcagcctgacgggaagcacccatgattatcaa
caggcggccaacaaaaacaatcccacccagacggtgacgcaaacccaacggtacgacaac
tgggggctggtgagtgagtcagtgagctctgaaggcgtaacaacctacacggaaaccgtc
ctggtcctccccccgacggggacgaactgcatctggcagctccgcagctggcagtcaggt
ggtacggatacatccggcatcacggtcaccacgctggacgataaccacaactcggtcaaa
accgagttgtacccgaaaaatgcgcaggtcggtaaaaatacgccttacagcgtcacgtac
agcgagtatgacggctggaaccagctacgcagccagactgatgagctggggcagaccacc
acttataagtacgatgactgggggcgtccgaccatcaccaccctgccggacaatacgcag
acgcacagggcttacgtggcgttcagctcagcgaaactccctgtctccatcagcgtgcta
gacagcaataacattccagtcccgggggtggggggtacgcagacgttcgacggcctgggg
cgactgaaaagcaccatcatcggtgggcgccacgcacgttactcgtaccagtttgcatac
cagcgccatccgaccgtgatttataacgaggcgggtaatcaggaggtttacacgtatatc
aatgcgctgggcgaagcccctgagtccctgagggcgtcaggcgtcgacattaacgtgagt
caggactggacttataacccggtcaccgcggcaatgatgacggcgacagaagacaaggac
acagaaaaccagcattccctccgctacggctatgccacgtcaggtcagcagaccagtgtt
accgtggaaaaagagggcgatattaaagaaaaaagcaccaacctcatggcccgcacgatt
ggtggaacagccaccactgtcagggactatgcaggcgggacgcagacgctcacgcttgac
atactgggtcgcgccacggcgttggacgacgcagacgtcagcagcacactgacatacgac
ggtctggggcaggtgacgcagtggacggtgaccagcaagaaaaaccattatacgaagacc
accacgctgacgctggatgagtacggacgtgaaacgcagcgcaccatcgaaacctgggac
gcccgcaacaccctgaaggacactctgacggtggtgcaggtatggagcaaaaaacaccag
gtaactcaccgcaccacgacgcaaacgacagcaggaaagaccgtgaccctgcgggacgag
tcttacgacttcgcccctgaacgcggctggttgatgcgctataccgtatccggcagcacc
ccgccgcaggatgaaaccggcaaggcgctgagcaggcaggatttcacctacgacagtgtg
accagtaacatgacaacgaagtctgtaacgtataccgacgacaccactacgttcacgatg
tacctgtttgagaacaaagacgaccagtgccaactgacggggataagaactgacacgggt
accacgacatcgctgaagtacgatgacgccggccgtctgacacaggatgagtacggtcgg
atgttgagctacgatgcgctggggcggttgtgcaaggtgacgctcaacggcagtacactc
acccgctaccggtatgatgcaggcaaccagctgtccgggcagacggtgggcgataccacc
acacgttattactacgggaatagcacgctggcgtacatggaggatgacgccaccccgaaa
aacgcggcactacttaccccgcacgcccaggtgcgtacgggtaaaaacgcaggaatttgg
ctgaccagcagcgatatggcggagagtgtgctgtcggtgacagacggcaccacacaggaa
aactatgcatatacaccgtacggggcgcgcaacggcgccagcagcaacgacgaagccatc
gctgtcacaggctacaacggcgagcggctggacggcacgctgaatcagtaccacctaggt
aatggctaccgtgcctacaatccggtactccagcgatttacctgcccagacagtttgagt
ccattcggggacggcggcatcaacccctatatctattgtgagggggaccctgttaatcgg
actgacccgacggggcacctcttcacagaaattgcgctcgctgcacgtgctgcttggaaa
gcgataagggattctgtgttggtgaggaaggttaccgacgcggcgggtggcatctggcat
aacgggaaaaccatgacggattccttgttcggaaaaagaccacccaaaaacagtctgggg
cgttcgtttcgggacggcgacactgcggccgggtcgaggaaggagccgcgtctgcagaaa
gaggtggattataaggtaacggaagcgtctagatcaccaatgtttaagtttaatgataat
attagaaagaatccagaacagctgtggagtcttcatgaggataacgggaaatatatatat
aacagccatacaaaggtaaatggttatggtgtggagaaagcatatgtcaatttaaaaaaa
atcagtaacaagcctatagatattattagtggttctcatggaggtaatttaggtgagggg
aattgggttgagatatttgggccaaacgcgaagcgggagggagtaataaggaatcctagt
tatttggaacataaatttctcatgcaagatttggctacattgaaaaaaaataagggattg
acggaccgagtttataacataaaaaatttagatcgtaatgagcttaataatatattacgc
aacccgaacacgaatgttattttaggatattgctatagcgctaacgacaattatatggct
agtgttgataacagaatatcttcattaatttttggctggcgttga
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integrated database retrieval system
