Xenorhabdus nematophila ATCC 19061: XNC1_2840
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Entry
XNC1_2840 CDS
T01274
Symbol
ycdR
Name
(GenBank) lipoprotein (HmsF protein of hmsHFRS Operon)
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
xne
Xenorhabdus nematophila ATCC 19061
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
DUF2334
A-sol_ELP1
Motif
Other DBs
NCBI-ProteinID:
CBJ90894
UniProt:
D3VJ37
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Position
complement(2841686..2843722)
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AA seq
678 aa
AA seq
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MTHNVFRHWLMISALLISLFIPQLHILAYAEKPEFVPPAQRPLSMNERPWPQNGYVVLAY
HDVEDDGADQRFMSVRTSALNDQFAWLRENGYQPVTVDQILAANQGDTPLPPKAVLLTFD
DGYSSFYHRVFPLLKAYNWPAILAPVGVWVDAPAGKPVNFGGLKVPRERFITWEQIAEMS
RSGLVEIGSHTYQHHYGVLGNPQGNTEPAAAIRIYNPKMGQYESGHVFRQRMEKDIAMIT
QRIIAATGKQPRVWVWPYGVDNGVTLEIAKRYGYKMALTLDDGLANASNLNNVPRILLTN
NPSLKEFAEQVIQVQNKPILRVAHIDLDYVYDPDPAQQASNLDQLVQRIADLRVNTVFLQ
AFADPKGDGNVRELYFPNRWLPMRADLFNRVSWQLHSRLNLDVYAWMPVLAFELNPAFPR
VMSYDENSNQLFMNPTQYRRLSPYNPENRQRIKEIYQDLAAHSIFQGILYHDDAVMSDFE
DAGPDAIKVYQAAGLPTSIADIRQNSEQFARWTRFKSQYLVDFINELTQEITSVRGYQIK
TARNIFAMPILEPDSEAWFAQNLDDFLTNYDWVAPMAMPLMENIPLSKSNQWLSRLVKTI
AQRPQALDKTVFELQAVDWHKPMNKSAIPGRQLAEWMRQLQLNGALSFGYYPDDFLNNQP
EMNEVRPVLSPEWYPLND
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaatgtttttcgccattggttaatgatatcagccctgctgattagcctgttc
attcctcagctgcacatcctggcatatgcagaaaaacccgaatttgttccacccgcgcag
cggcctctctccatgaatgaacgcccctggccacaaaacggttatgttgttctggcctat
catgatgtggaggatgatggcgctgatcaacgttttatgtctgtccgtaccagcgcattg
aacgatcaatttgcatggttgcgggaaaatggctatcaaccggttaccgtcgatcaaatt
cttgctgccaatcaaggtgatacgcctttaccgcctaaagccgtattactgactttcgac
gatggatacagcagtttttaccatcgggtgtttcctctgctgaaagcctataactggccg
gcaattctggcacctgtcggggtttgggttgatgcaccagccggaaaacctgttaatttt
ggcggattgaaagtaccgcgggaacgtttcattacatgggaacagattgctgaaatgtcc
cgctcaggtttagttgaaatcggttcccatacttaccagcatcattatggtgttctcggc
aatccgcagggaaataccgaacctgccgctgccattcgtatttacaatccgaaaatgggt
caatatgaaagtggtcatgtgtttcgtcaacgcatggaaaaagatattgccatgattact
caacggatcattgccgccacgggcaagcaaccccgggtctgggtctggccctatggcgtg
gataacggcgttactctggagatagccaaacgctatggctacaagatggcgctgacactg
gatgatggcttagcgaatgccagcaatcttaacaacgttccgcgcatattgctgactaat
aacccctctctgaaagaattcgccgaacaggttattcaggttcagaataaacccatctta
cgggttgcccatattgatctggactatgtttatgatcctgatcctgctcagcaagccagt
aatctcgatcagctcgtacaacgcattgccgatctgcgtgtcaataccgtttttctgcaa
gccttcgctgatccgaaaggggatggcaatgtacgggaactctattttcctaatcgctgg
ctgccgatgcgggctgatttatttaatcgcgtctcctggcaactgcatagccggttaaat
cttgatgtttacgcctggatgccggttttagcatttgagctaaaccccgcattcccgcgt
gtgatgagctatgatgaaaatagcaatcagctatttatgaatccaacacaataccggcgc
ttatcgccttataacccggaaaatcgccaacgcattaaagaaatttatcaagatttggcg
gctcactccatttttcagggcattctgtaccacgacgatgccgttatgtcggactttgaa
gatgccggcccggatgccattaaagtctaccaagccgctggcttacccacttctattgcc
gacattcgtcagaattccgaacaatttgcccgttggactcgcttcaaaagccagtatctc
gttgactttattaatgaactgacacaagagattacgtctgtacgaggttatcaaatcaaa
actgcgcgcaatatttttgccatgccgattctggagcccgacagcgaagcgtggtttgcc
caaaatctggatgattttctcaccaattacgattgggttgccccgatggcaatgccattg
atggaaaatatccctttatcaaaaagcaatcagtggctatcccgtttggtaaaaaccata
gcacaacgcccacaggcactggacaaaactgtctttgaacttcaggccgtagactggcac
aaaccaatgaataaaagcgccattcccggtcgtcaattagcagaatggatgcgtcaatta
cagttgaatggtgctctgagttttggttattaccctgatgattttctcaataatcaacca
gaaatgaatgaggttcgtcccgttctttctccagaatggtacccgcttaatgattga
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