Xenorhabdus nematophila ATCC 19061: XNC1_2855
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Entry
XNC1_2855 CDS
T01274
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A, type II topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xne03032
]
XNC1_2855 (gyrA)
03400 DNA repair and recombination proteins [BR:
xne03400
]
XNC1_2855 (gyrA)
Enzymes [BR:
xne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
XNC1_2855 (gyrA)
DNA replication proteins [BR:
xne03032
]
Prokaryotic type
DNA Topoisomerases
XNC1_2855 (gyrA)
DNA repair and recombination proteins [BR:
xne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XNC1_2855 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CBJ90909
UniProt:
D3VJ52
LinkDB
All DBs
Position
complement(2865659..2868298)
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AA seq
879 aa
AA seq
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MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYIDDENISIEGLMEYIPGPDFPTAAIINGRRGIQEAYRTGRGKI
YIRARAEVEADEKTGRETIIVNEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKDILSAFVCHRRE
VVTRRTIFELRKARERAHILEALAIALANIDPVIELIRRASTPAEAKASLVSQPWELGNV
AAMLEQAGDDAARPEWLEPEYGIHEGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYRE
LLKVIAELLFILENPERLMEVIREELLAIKEQYNDARRTELTENSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARTKEEDFIERLLVANTHDTILCFSNKGKMY
WMKVYQLPEASRGARGRPIVNLLPLGQNERITAILPVREYEDGLNIFMATASGIVKKTKL
SEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAQGKVVRFLEEEEETLEDGTVR
VKGVRAMGRTATGVRGIKLSAGDKVVSLIIPRGEGEILTVTENGYGKRTAESEYPTKSRA
TQGVISIKVSERNGNVIGAIQVEPTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRT
AEDEKVVGLQRVAEPDDEEEDNNTMASPLEGHDGPEDQA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgccagagaaatcacaccggtcaatatcgaagaagagctgaaaagctca
tatctggattatgcgatgtccgttattgttggacgcgcacttccagatgttcgagatgga
ctgaagccagtacaccgtcgcgtacttttcgcgatgaacgtattaggaaatgattggaat
aagccttataagaaatcggcccgcgttgtcggggatgttatcggtaaatatcatccacat
ggtgacagcgcggtttatgacacgattgttcgtctggcacaacccttctccatgcgttac
atgctggttgacggtcaggggaactttgggtcagtagatggtgattctgcagcagcgatg
cgttataccgaagtacgcatggcaaaaattgcccatgaattgctggcagatttagaaaaa
gaaactgtcgattttgtgcctaactatgacggcacagagcaaatcccagaagtcatgcct
acccgtatccccaatctgttggtgaatggctcatcagggattgcagtaggtatggcaacc
aacatcccacctcataacttatctgaggtgattgacggctgtctggcttatattgatgat
gaaaacatcagtatcgaaggtctgatggaatacatccctggccctgactttccgacagcc
gccattatcaatggtcgtcgtggtattcaggaagcctatcgtaccggtcgtggtaaaatt
tatatccgcgcgcgcgcagaagttgaagctgacgaaaagacgggccgcgaaaccattatc
gtcaatgagatcccctatcaggttaacaaagcccggctgatcgaaaaaatcgcagaactg
gtaaaagagaagcgtattgaagggatcagtgcactgcgtgacgaatctgataaagatggg
atgcgcattgttattgaagtaaaacgcgatgccgttggtgaagttgttctgaacaatctc
tattcactgacccaattacaagtttcatttggtatcaacatggttgccctgcaccaaggg
caaccaaaattacttaacctgaaagatatactttctgcgtttgtttgccaccgtcgtgaa
gttgtcacccgcaggacgatttttgaactgcgcaaagcccgcgaacgtgctcatattctt
gaagcacttgctattgcactggcgaatattgacccagtcatcgaactgatccgccgtgcc
tctaccccggcagaagctaaagcgagcctggtttctcagccttgggaattgggtaatgtt
gccgctatgctggaacaagccggggatgacgcagcgcgcccggaatggctggaaccggag
tatggtattcatgagggtaaatattatctgactgaacaacaggcacaggcaattttggat
ctgcgtctgcaaaaattgaccggtctagagcatgaaaaactactcgatgaatatcgtgaa
ctgctgaaagtcattgctgaactgttgttcattttggaaaacccagaacgtttgatggaa
gtgattcgtgaagaattgcttgctatcaaagaacagtataatgatgcccgtagaactgaa
ttgaccgaaaattcagcagatatcaatatcgaagacctgattaatcaggaagatgttgtc
gtcactctatctcatcagggatacgtgaaatatcagccattatctgactacgaagctcag
cgtcgtggtggtaaaggtaaatcagcggcgcgcaccaaagaagaagatttcattgagcga
ttgctggtggctaatacccacgataccatcctttgtttttcaaataagggcaagatgtac
tggatgaaggtatatcaattgccggaagccagccgtggcgctcgtggtcgtccgattgtc
aacctcttgccactgggtcaaaatgaacgtattaccgccattttgccggtacgtgaatat
gaagacggcttaaatatcttcatggcaacagcaagcgggatcgttaaaaagactaaactc
agcgaattcagccgtccacgcagcgccggtatcatcgcagtgaatctgaatgaaggggat
gaactgattggagtcgatctgacagatggcagtaacgaagtcatgctcttctctgctcag
ggtaaagttgttcgtttccttgaagaagaggaagaaacactggaagacggtactgttcgt
gtgaaaggcgtccgtgcgatgggacgtaccgcaactggggttcgcggtatcaaactcagc
gcaggcgataaagttgtttccctgatcattcctcgtggagaaggagagatcctgactgtc
accgaaaatggttatggtaaacgcactgcggaaagtgaatatccaaccaaatcccgtgca
acccaaggagttatttccatcaaggtcagcgaacgtaacggtaatgttatcggtgcaata
caagtagaaccgactgatcagatcatgatgattactgatgcgggtacattggtgagaacc
cgtgtttctgaagtcagcgttgttggccgcaatacacaaggtgtaactcttatccgtaca
gctgaagacgaaaaagtcgttggtttgcagcgtgttgctgaacctgacgatgaggaagaa
gataacaatacaatggcttctccccttgaaggacatgatggcccggaagatcaagcgtaa
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