Xenorhabdus nematophila ATCC 19061: XNC1_3252
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Entry
XNC1_3252 CDS
T01274
Symbol
ung
Name
(GenBank) uracil-DNA-glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XNC1_3252 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xne03400
]
XNC1_3252 (ung)
Enzymes [BR:
xne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XNC1_3252 (ung)
DNA repair and recombination proteins [BR:
xne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XNC1_3252 (ung)
Prokaryotic type
XNC1_3252 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
FragX_IP
Motif
Other DBs
NCBI-ProteinID:
CBJ91304
UniProt:
D3VLH8
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All DBs
Position
complement(3180999..3181679)
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AA seq
226 aa
AA seq
DB search
MSVPLTWHDVIGNEKKQPYFVDTLAYVANERKAGKTIYPPQQDVFNAFRYTELADVKVVI
LGQDPYHGPNQAHGLAFSVQPGIPAPPSLVNMYKELESDIAGFTRPNHGCLVSWAKQGVL
LLNTVLTVERGNAHSHANLGWETFTDKVIAAINEHRRGVIFLLWGSHAQKKGRFIDTQRH
HVLKAPHPSPLSAHRGFLGCKHFSQANRLLEKQGLPLIDWTPQLPQ
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacctctcacatggcacgatgtcatcggcaatgaaaagaaacagccttatttc
gttgatacattggcttatgttgctaatgaacgtaaggccggaaaaaccatttatccgcca
caacaagatgtttttaacgcatttcgctataccgaattggctgatgtaaaagtggtgatt
ttgggacaagacccttatcacggcccgaaccaggctcacgggttagccttctctgtacaa
ccgggcattcctgctccgccttctctcgttaatatgtacaaagaactggaatcggatatt
gccgggtttactcgccctaatcatggttgtttagtgagttgggcaaaacagggggtatta
ttgctcaataccgtgttaacagttgaacggggcaatgcccattcccatgctaatttggga
tgggaaaccttcaccgataaggtcatcgcagcaatcaatgagcatcggcgcggggttatt
ttcctgctctggggttcacacgcccagaaaaaaggccgctttattgatacccaacgccat
catgtattaaaagcgccacatccgtctcctctatccgctcatcgaggttttttaggttgt
aagcatttttctcaggccaatagattgctggaaaagcaaggattacccttgatagattgg
acaccccaattacctcaataa
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