Xenorhabdus nematophila ATCC 19061: XNC1_3273
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Entry
XNC1_3273 CDS
T01274
Symbol
rnc
Name
(GenBank) RNase III, ds RNA
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xne03019
]
XNC1_3273 (rnc)
03009 Ribosome biogenesis [BR:
xne03009
]
XNC1_3273 (rnc)
03036 Chromosome and associated proteins [BR:
xne03036
]
XNC1_3273 (rnc)
Enzymes [BR:
xne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XNC1_3273 (rnc)
Messenger RNA biogenesis [BR:
xne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XNC1_3273 (rnc)
Ribosome biogenesis [BR:
xne03009
]
Eukaryotic type
90S particles
RNase
XNC1_3273 (rnc)
Prokaryotic type
rRNA processing factors
XNC1_3273 (rnc)
Chromosome and associated proteins [BR:
xne03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XNC1_3273 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CBJ91325
UniProt:
D3VLJ9
LinkDB
All DBs
Position
3199012..3199692
Genome browser
AA seq
226 aa
AA seq
DB search
MNAILTNRLQHKLGYTFTQHDLLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGHRRESILADSIEALI
GAIFLDSDIQTIEKIILNWYETRLNEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGFEQPVRGVGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccatactaacaaaccggttacaacataagctaggatatacctttacacagcac
gatttattgctccaagcgttaactcaccgcagcgctagcagcaaacataacgaacgtctg
gaatttctcggcgactctattctgagttttgtcattgcaaatgcgctttatcaccgtttt
ccccgtgttgatgaaggggatatgagccgtatgcgggcaacattggtacgtggtaataca
cttgcagaattggccagagaatttgagttaggtgaatgtcttcgtctgggaccgggggag
ttaaaaagtggagggcatcgcagagaatccattttagcggatagcatcgaggctttaatt
ggcgctatatttcttgatagtgatattcagacaatcgaaaagattatcctgaattggtat
gaaactcgtttgaatgaaattagccccggcgataaacaaaaagatcccaaaacacgttta
caagaatatttgcaagggcgtcatttgccgttgccaacatatctggttgttcaagttcgt
ggggaagcacacgatcaggaatttacaattcactgtcaggtcagtggatttgaacaacct
gtcagaggagtaggttccagtcgccgcaaggcagagcaggcggctgcggaacaagcatta
aaacaactggagcttgaatga
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