Xenorhabdus nematophila ATCC 19061: XNC1_3875
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Entry
XNC1_3875 CDS
T01274
Symbol
fadB
Name
(GenBank) multifunctional: 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00071
Fatty acid degradation
xne00280
Valine, leucine and isoleucine degradation
xne00310
Lysine degradation
xne00362
Benzoate degradation
xne00380
Tryptophan metabolism
xne00410
beta-Alanine metabolism
xne00640
Propanoate metabolism
xne00650
Butanoate metabolism
xne00907
Pinene, camphor and geraniol degradation
xne00930
Caprolactam degradation
xne01100
Metabolic pathways
xne01110
Biosynthesis of secondary metabolites
xne01120
Microbial metabolism in diverse environments
xne01200
Carbon metabolism
xne01212
Fatty acid metabolism
Module
xne_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XNC1_3875 (fadB)
00650 Butanoate metabolism
XNC1_3875 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XNC1_3875 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XNC1_3875 (fadB)
00310 Lysine degradation
XNC1_3875 (fadB)
00380 Tryptophan metabolism
XNC1_3875 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XNC1_3875 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XNC1_3875 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XNC1_3875 (fadB)
00930 Caprolactam degradation
XNC1_3875 (fadB)
Enzymes [BR:
xne01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XNC1_3875 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XNC1_3875 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XNC1_3875 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
XNC1_3875 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
CBJ91903
UniProt:
D3VBR4
LinkDB
All DBs
Position
3732677..3734863
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AA seq
728 aa
AA seq
DB search
MLYLSDTIQVKWLKDGIAELIFNAPAEINKLDTKTVTSLDKAVAALEQQTELKGLLLRSE
KQAFIVGADITEFLSLFNAPTEELHELLNLANNIFNRIEDLPVPTVSAINGYALGGGCET
VLSTDFRIASPDVRIGLPETKLGIMPGFGGSVRLPRLIGTDNALEIITAGKDIGAEEALK
NGLVDAVVPAAKLVDSAVSILEQAIKGDLDWKAARQPKLMPLNLNEIERTMSFSVAKGMV
MKIAGPHYPAPITAVKAIEKAATLSRDEALKLESDSFVTLAHTPVARALVGIFLNDQYVK
GLAKKHLQAVTTPEHAAVLGAGIMGGGIAYQSARKGIPVLMKDINQKALDLGINEAAKLL
NKQFERGRLEAMKMAKILSSIQPSLSYAGIEQSQIVVEAVVENPKIKAAVLAETESHISD
ECILASNTSTIPITELANSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDKTISTVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFRQIDKIMEKEFGWPMGPAYL
LDVVGIDTAHHAQAVMAQGFPDRMSRDYRDAIDVLFENQRYGQKNGVGFYQYTQDKKGKP
KKEQDETTDQLLAGISQPKQAFTSEEIIARTMIPMINEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGVFRYLDTLGTAAYVKMAESYIHLGDLYQVPAGLKAKSESNESYYPAPAEL
AVNPGKKA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctaagtgacactattcaagtaaaatggctgaaagatggcattgcagaactg
atcttcaatgcaccagctgaaattaataaattagatacaaagacggtgacttcgctggat
aaagccgttgctgcccttgagcaacaaacagaactgaaagggttgttgttacgttctgaa
aaacaagcctttattgttggcgcagacatcacagaatttctatcattattcaacgcacca
acagaagaacttcacgaactactgaatcttgccaataatattttcaaccgtattgaagac
cttccagttcctacggtctctgccattaacggctatgctcttggtggtggttgtgaaaca
gtgctttctactgatttccgtatcgcctctcccgatgttcgtatcggattaccagaaacc
aaattgggcattatgcccggcttcggtggttctgtccgtctgccacgcttaattggtacg
gataacgctcttgaaattattactgcgggtaaagatatcggtgctgaagaagcattgaaa
aatggcttggttgatgctgttgttcctgctgcaaagctcgtggactctgctgtttcaatt
ctggaacaagccattaaaggtgatttagattggaaagcggcccgtcaacctaagctaatg
ccactgaatctcaatgagatcgaacgtactatgagctttagtgtggcaaaaggcatggta
atgaaaattgccggtcctcattatcctgcgccaatcactgcggttaaagccattgaaaaa
gcagcaacattaagccgcgatgaagcccttaaattagaatctgacagttttgttacactc
gctcatacccctgttgcccgtgctttagtcggcatcttcctgaatgaccaatatgtcaaa
gggctagccaaaaaacatttacaagcagtcacaacacctgaacatgcagcggtactcggt
gcagggatcatgggtggaggcattgcctatcaatctgctcgcaagggcatccctgtcctg
atgaaagacatcaatcaaaaggcgttggatttaggtatcaatgaagcggctaaattactg
aataagcaatttgaacgcggacgtttggaagccatgaagatggctaaaatcttgtcatcc
attcagccaagcctcagctatgctggcattgaacaatcccagattgttgtcgaagctgtc
gttgaaaatcccaaaattaaggctgctgttttagcagaaacagagtctcatatcagcgat
gagtgcattctggcgtctaatacctccacaattccaatcaccgaattagcaaactcgctg
aaacgcccagaaaatttctgtggaatgcattttttcaatccagtacatcgtatgccactg
gttgaaattattcgtggagaaaagacatcagataaaaccatttcaacggttgtcgcttac
gccagcaaaatgggtaagacaccgattgtcgtcaatgactgccctggcttctttgtaaac
cgcgtcttgttcccgtatttggctggttttggcatgttagtccgtgatggcggtgatttt
cgtcaaatcgacaaaatcatggaaaaagagtttggctggccaatgggccctgcttatctc
cttgatgttgtcggtattgatacagctcaccatgcacaggctgttatggcgcaaggcttc
cctgatcgtatgagccgagattatcgggatgccattgacgtattattcgaaaatcaacgt
tatggccagaaaaatggtgttggtttctatcaatatacccaagataaaaaaggcaaaccg
aaaaaagagcaggatgaaactaccgatcaactcttggcaggcatcagtcaaccaaaacag
gctttcaccagtgaagagatcattgcgcgtaccatgatcccaatgattaacgaagtcgtt
cgttgtttggaagaaggtatcattgccagcccagcggaagcagatatggcgctggtttat
ggtttaggcttccctccattccacggcggtgttttccgttatctggataccttggggact
gcggcctatgtgaagatggctgaaagttatatccacttgggtgatctctatcaagtacct
gctggcctgaaagcaaaatccgaaagcaatgaaagttattaccctgccccagcagaactt
gctgttaatccaggcaaaaaagcgtga
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