Xenorhabdus nematophila ATCC 19061: XNC1_3992
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Entry
XNC1_3992 CDS
T01274
Symbol
rnhB
Name
(GenBank) RNAse HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XNC1_3992 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xne03032
]
XNC1_3992 (rnhB)
Enzymes [BR:
xne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
XNC1_3992 (rnhB)
DNA replication proteins [BR:
xne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
XNC1_3992 (rnhB)
Elongation factors (archaeal)
XNC1_3992 (rnhB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
CBJ92017
UniProt:
D3VCI2
LinkDB
All DBs
Position
complement(3853814..3854404)
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AA seq
196 aa
AA seq
DB search
MDFVYPQANLIAGVDEVGRGPLVGDVVTAAVILDPAKPITGLMDSKKLTEKRREALYLEI
KEKALCWSLGRAEPEEIDQLNILHATMLAMQRAVAGLVIVPDYVLIDGNRCPALAMPSQA
VVKGDSLVAEISAASILAKVTRDREMAELDNQFPDYGFAKHKGYPTALHLEKLALHGATA
HHRKSFAPVKRALGLG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtttatccgcaggcgaatttgattgctggtgttgatgaagtcgggcgtggc
ccattggttggtgacgttgttactgcggccgtcattcttgatccggctaaacctattaca
ggcttgatggattcgaaaaaattgacggaaaaacgccgtgaagcgttgtatcttgaaatt
aaagaaaaggcattgtgctggagtcttggtcgggcagagccggaagaaatcgatcaactc
aatatcctccatgccacaatgcttgccatgcagcgggctgttgcgggtttggtcatcgtg
cctgactacgttctgattgatggtaaccgttgcccggcattagcaatgccttcacaagcc
gtggtgaaaggggatagtttggttgccgaaatcagtgcagcttctatccttgctaaagtg
acacgtgacagagaaatggccgaactggataaccaattccctgattacggttttgcgaaa
cacaaaggttatccgacggcgctgcatctggaaaaattagctttgcatggcgccacggca
catcatcgtaaaagttttgcgccggttaaacgggcgttaggtcttggataa
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