Xenorhabdus nematophila ATCC 19061: XNC1_4014
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Entry
XNC1_4014 CDS
T01274
Symbol
truC
Name
(GenBank) pseudouridine synthase
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xne03016
]
XNC1_4014 (truC)
Enzymes [BR:
xne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
XNC1_4014 (truC)
Transfer RNA biogenesis [BR:
xne03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
XNC1_4014 (truC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CBJ92039
UniProt:
D3VCK4
LinkDB
All DBs
Position
complement(3875387..3876139)
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AA seq
250 aa
AA seq
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MLDIIYQDEHIVAVNKPAGWLVHRSWLARHETVFVMQTLRDQIGQHVFPVHRLDRPTSGV
LLMALSSEVARTLSQQFEFHDIQKTYHAVVRGYVEGDDIIDYALMEQLDKIADKFADTDR
EAQSAITHYRPLAKVECPVEIGRYSTSRFSLLELMPKTGRKHQLRRHMAHIRHPIIGDTT
HGDLRQNRGVDKYYQTGRLMLHASHLQLKHPVTGDDLILTARWDTSWQHLFEQFGWKGIV
PDLECLTAHE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgttggatattatttatcaggatgagcatatcgttgcagtcaataaacccgctggttgg
ctggttcatcgtagctggctggcgcgccatgaaaccgtttttgttatgcagacgctgcgg
gatcaaatcgggcagcatgtttttcctgttcatcgattggacaggccaacatccggtgtt
ttgttgatggcgctttcaagtgaagtcgccagaacgctttcacaacaatttgaattccat
gatatacaaaaaacgtatcatgcggttgtgcggggttatgttgaaggtgatgatattatc
gactacgccctaatggaacagttggacaaaatcgccgataagtttgctgatacagacaga
gaagctcagtcagcgattacgcattaccgtccattggccaaagttgaatgtccggttgaa
atagggcgttactcaacatcacgtttcagcctgctggaactgatgccgaaaaccggtcgt
aagcatcaattacggcggcacatggcacatatcaggcatcccattattggggatactacg
cacggtgatttgcgacaaaatcgaggggttgataaatattatcagactggtaggttaatg
ctgcatgccagtcatcttcagctcaagcatcctgtaacaggcgatgatcttattctgacc
gcacgttgggacacgtcgtggcagcatttatttgaacaatttgggtggaagggtattgta
cctgatttggaatgtttaaccgcccatgaatga
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