Xenorhabdus nematophila ATCC 19061: XNC1_4059
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Entry
XNC1_4059 CDS
T01274
Symbol
hepA
Name
(GenBank) ATPase associated with RNA polymerase and transcriptional activator
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xne03021
]
XNC1_4059 (hepA)
Transcription machinery [BR:
xne03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
XNC1_4059 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CBJ92084
UniProt:
D3VCP9
LinkDB
All DBs
Position
3927719..3930628
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AA seq
969 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTIVALDARMVTLLFPASGENRLYARNDSPITRVMFNVGDT
VTSHEGWKLKIDDVQQDNGLLIYVGTRLDTEEENTCLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRLRARKHQSEQFRLAESGLRGIRASLIPHQLHIANEVGKRHAPRVLLADEVG
LGKTIEAGMIIHQQLMAGRAERVLVIVPDSLQHQWLVEMLRRFNLRFSLFDDGRYTEALH
DSDNPFETEQLVICSLDFVRRNKQRFEHLLEASWDLMVVDEAHHLEWSEKAPSREYHVIE
QLSEQIPAVLLLTATPEQLGQESHFARLRLLDPNRFHDYQAFIDEQQKYRPVADAVTLLL
SGEILSNDQQNAIVELISEQDIEPLLKAVNSQQDEESNNARRELVAMLMDRHGTSRLLFR
NTRGGVKGFPHRELHEIKLPLPAQYQTAIKVSEIMGAKKTVEARAKDMLYPERIYQEFEG
ENATWWNFDPRVEWLMGFLMANRDEKVLVICAKAETALQLEQVLREREGIRSAVFHEGLS
LLERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDR
IGQTRDIKISVPYLENTAQSILLRWYHEGLDAFEHTCPTGRPIYDKYYEVLLNFLAKPNE
QTGFNEFIAECRTHHEQLRQQLEQGRDRLLEMNSNGGEQGQQLAEKIAAQDNDTDLVNFA
LNLFDIVGINQEDHSDSIIALHPSDHMLVPDFPGLPKDGCSITFDREKALSREDTQFLSW
EHPIIRNGLDLILSGDTGSCAVSILKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPT
PVRLLLDLKGTDLAPQVEFESFNRQLNAINRHNASKLVNAVQKEVHAILQQSEPLIEKQS
RELIEKAKKEADEALSAELSRLEALKAVNPNIRDDELDAIESEHKHVLLNLDQATWRLDA
IRLVVVSHQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggatcagcgatacagaaagcgaacttggattagga
acaatcgtagcgcttgatgcgcgtatggtgacgttgctttttcctgccagcggagaaaac
cgcctttacgcacgcaatgattcccccattactcgcgttatgtttaatgtgggtgatacc
gtgaccagtcacgaaggctggaaactcaagatcgatgatgttcagcaagataatggcctg
ctgatctatgtcggtactcgtctggatactgaagaagaaaatacctgcctgagagaagtt
tttctggatagcaaactgacgttcaataaacctcaggatcgcctgtttgccggtcaaatt
gaccgcatggatcgctttgctctgcgtcttcgcgcccgtaaacaccaaagcgagcagttt
cgcttagcagaaagcgggttgcgtggcattcgggcgagtttgatccctcaccagctacat
attgccaatgaagtcggcaagcgccacgcgcctcgtgtattactggcggatgaagtggga
ttaggtaaaacaattgaagccggcatgatcattcaccagcaattgatggcaggacgcgca
gaacgtgtgctggttatcgtgccagacagtctgcaacatcagtggctggtagaaatgctg
cgccgattcaacctgcgtttctccctgtttgatgatggacgctacaccgaagcccttcat
gacagcgataacccgtttgaaactgagcaattggttatctgctctctggattttgttcgc
cgtaataagcaacgtttcgaacatttgctggaagcgagttgggatttgatggtcgtggat
gaagctcaccatctggagtggagtgagaaagccccgagccgcgaatatcacgtcatagaa
caactgtcagaacaaattcctgctgttctgttgctgacagccacaccggagcagttgggc
caggagagccactttgcccgcctgcgtctgctggacccgaatcgcttccatgattatcaa
gcatttattgacgaacaacagaaatatcgtcctgttgccgatgccgtgacgttactgtta
tcgggtgaaatcctgagcaatgaccagcagaatgccattgtcgagctgattagtgagcaa
gatattgaacctctgttgaaagcagtcaacagccagcaggatgaagaaagcaacaatgcg
cgccgtgaactggttgctatgctgatggatcgtcatggaaccagccgcctgttattccgt
aatacccgtggtggcgtgaagggtttcccgcatcgggaattgcacgaaatcaagttaccc
ctgccggcccaataccagacggcaatcaaggtatctgaaatcatgggtgccaaaaagacc
gtggaagcccgcgctaaagatatgctctatcctgagcgaatctatcaggaattcgaaggt
gaaaacgccacatggtggaacttcgatccacgcgtagaatggttgatgggtttcctgatg
gcaaaccgcgatgaaaaagtgctggtcatctgtgccaaggcagaaactgccctgcaactg
gagcaggttctgcgtgagcgggaaggcatccgcagcgcagtattccacgaaggtttgtcc
ctgttggaacgcgaccgcgccgccgcttacttcgcttccgaagaagaaggggcacaagtg
ctgctctgttctgaaattggctctgaaggacgtaacttccagtttgccaatcagcttgtt
atgtttgatttgccgttcaatcctgatttgctggaacaacgcatcggtcgtctggatcgc
atcggtcagacccgtgatattaaaatcagtgtgccttatctggaaaatacggcgcaatcc
attctgttgcgttggtatcacgaaggtttggatgcgtttgagcacacctgcccaaccggt
cgccctatctatgacaagtattatgaagttctgttgaacttccttgccaaaccgaatgag
caaaccggcttcaatgagtttattgcggaatgccgcacgcaccatgaacagctcagacag
caattggagcaaggtcgtgaccgtctgctggaaatgaactccaatggcggcgaacaaggc
cagcaactggcagaaaaaattgctgcgcaggataacgataccgatctggtcaattttgcc
ctgaatctatttgatatcgtcggcatcaatcaggaagatcacagtgacagcattattgcc
ctgcatccctctgatcatatgctggtgccggatttcccgggattgccgaaagatggctgc
tcaattacgtttgatcgtgagaaagcactctcccgtgaagatactcaattcctgagctgg
gaacacccaatcattcgcaatggcctggatttaattctgtccggcgatacaggaagctgt
gctgtttctattctgaaaaataaagcactgccggtaggaaccctgttagttgaattggtc
tacgttgttgaagcccaagcaccgaaacacctgcaattgacgcgtttcttaccacccacg
ccagtgcgcctgttgttggatctgaaaggcacggatctggcgcctcaggtggaatttgaa
agcttcaaccgccagctcaatgccatcaatcgccacaacgccagcaaactggtgaatgcg
gtacagaaagaagttcatgcgattttacaacaatcagagcctctgattgaaaaacaatca
cgtgaattgattgagaaggcgaagaaagaggctgatgaagcgctgtcagcagaattatca
cgtctggaagccctgaaagcggttaacccgaatatccgtgatgatgaactggatgcgatt
gaatccgagcataaacacgtactgctcaatcttgatcaggctacttggcgtttggatgca
attcggttggttgttgtttctcaccaataa
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