Xenorhabdus nematophila ATCC 19061: XNC1_4156
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Entry
XNC1_4156 CDS
T01274
Symbol
yraL
Name
(GenBank) putative enzyme with Cobalt precorrin-4 methyltransferase domain
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xne03009
]
XNC1_4156 (yraL)
Enzymes [BR:
xne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
XNC1_4156 (yraL)
Ribosome biogenesis [BR:
xne03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
XNC1_4156 (yraL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
CBJ92181
UniProt:
D3VDE1
LinkDB
All DBs
Position
complement(4012957..4013820)
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AA seq
287 aa
AA seq
DB search
MNQTNRAVVTTSTLYVVPTPIGNLGDITQRALEVLKHVDLIAAEDTRHTGLLLQHFAINA
RMFALHDHNEQQKADQLIAKLEQGISIALVSDAGTPLINDPGYHLVRRCREAGINVVPLP
GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRQDTLRELAQEPRTLIFYESTHRLLDSLE
DIVEVWGADRYVVLARELTKTWESIQGMPVGELLAWIKEDETRRRGEMVLIVEGYRQPAE
NSLPPDALRTLALLQKELPLKKAAALAAEIHGVKKNALYRYALEQEA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaccaatcgagcagtggttacgacatccacgctgtatgttgtgccaacccct
attggaaatcttggggatattacccagcgtgctcttgaagttcttaaacatgtcgatctg
attgcagccgaagatacgcgacacactggcttgttgcttcaacattttgccattaatgcg
cgcatgttcgcacttcatgatcataatgaacagcagaaagcagatcaattgatcgcaaaa
ctggaacaagggattagcatcgcattagtgtctgatgcaggtacacctttgatcaacgat
ccgggctaccaccttgtccgtcgttgccgggaagccgggattaatgtcgttccgttgccg
ggtccctgtgctgcgattacagcgctgtctgctgcgggtctgccttccgatcgtttttgc
tatgaaggtttcctgccagccaaaagtaaaggacgtcaggatacactacgggaattagcg
caggaaccgagaacgcttatcttctacgaatcgacacatcgtttgttggacagtttagaa
gatattgtcgaagtctggggagcagatcgttacgttgtgctggcacgtgaactgactaaa
acatgggaatcgatccaaggaatgccggtaggggagcttctggcatggataaaagaagat
gaaacccgccgccgcggagaaatggtgctgattgtggaaggttatcgtcaacccgcagaa
aacagcctgcctcccgatgcgttgcggacattggcattgctgcaaaaggagctgccattg
aaaaaggctgcggcactggcggccgaaatccacggcgtgaaaaaaaatgcactgtatcgt
tatgctcttgagcaagaggcttaa
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