Xenorhabdus nematophila ATCC 19061: XNC1_4237
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Entry
XNC1_4237 CDS
T01274
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne00260
Glycine, serine and threonine metabolism
xne00460
Cyanoamino acid metabolism
xne00630
Glyoxylate and dicarboxylate metabolism
xne00670
One carbon pool by folate
xne00680
Methane metabolism
xne01100
Metabolic pathways
xne01110
Biosynthesis of secondary metabolites
xne01120
Microbial metabolism in diverse environments
xne01200
Carbon metabolism
xne01230
Biosynthesis of amino acids
xne01240
Biosynthesis of cofactors
xne04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XNC1_4237 (glyA)
09102 Energy metabolism
00680 Methane metabolism
XNC1_4237 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XNC1_4237 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
XNC1_4237 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XNC1_4237 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
XNC1_4237 (glyA)
Enzymes [BR:
xne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
XNC1_4237 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
CBJ92260
UniProt:
D3VDM0
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All DBs
Position
complement(4081686..4082969)
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AA seq
427 aa
AA seq
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MLKCGMNIANYDPELWQVMEQEVRRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYIDIVEQLAINRAKELFGADYANVQPHSGSQANMAVYMTLLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNVVPYGIDENGKIDYDDIRNQALKHQPKMIIGGFSAYSGV
VDWAKMREISDEIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPCGQGGPLMHVIAGKAVALKEAMEPEFRVYQRQVAKNAKEMVD
VFLQRGYKIVSGGTENHLMLLDLVNKDITGKEADAALGRANITVNKNSVPNDPRSPFVTS
GIRIGTPAITRRGFKEAETRELAVWICDVLDNINDESVIECVKQKVLGAVDVLSSSFTQP
TSAATQW
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagtgtggaatgaatattgcgaattacgatccagaattgtggcaagtaatggaa
caggaagttcgccgtcaagaagaacatattgagctaattgcttctgaaaactataccagt
ccaagagtgatgcaggctcaaggatctcagctcactaataaatatgcggaaggctatccg
ggtaagcgttactacggtggctgtgagtatattgatatcgttgaacaattagctattaac
cgagcaaaagaattgtttggtgcagattatgccaatgtccagccacactccggttcgcag
gcaaatatggctgtctatatgactctattgcaacccggagatactgttttaggcatgaat
ttggcgcatggtggtcacctgactcacggctctccagtcaacttctctggtaaactttat
aatgttgttccttacggcattgatgaaaatggtaagattgattatgatgatatccgcaat
caagcgttaaaacatcagcctaaaatgatcatcggcggtttttccgcttattctggagtt
gttgactgggctaaaatgcgtgaaatttccgacgaaatcggagcatatctttttgtcgat
atggctcatgttgcaggcctgattgctgcgggtgtttatccgaatccggttcctcatgct
catgttgtcaccacgacaactcacaaaacactggctggtccacgcggcggcctgattttg
gcgaaaggtggtgatgaagaactttataagaaactgaactctgctgttttcccttgtggt
cagggtggtccattgatgcacgttattgcaggtaaggcagtagcattgaaagaagctatg
gaaccggaattcagagtatatcagcgacaagttgctaaaaatgcgaaagagatggtcgat
gtatttctgcaacgcggttacaaaatagtttctggtggtactgaaaatcatctgatgtta
ctggatctggtgaataaagatatcacaggaaaagaggcagatgcagcattggggcgagcc
aatataacagttaacaaaaacagtgtacctaacgatcctcgtagtccgtttgttacttcc
ggtatccgtattggtactccagctattactcgtcgcggtttcaaagaagctgaaactcgt
gagctagcagtctggatatgtgatgtgctggataacatcaatgacgaatcagtgattgag
tgtgttaaacagaaagtattaggggctgttgacgttttgagttcatcatttactcaaccc
acatcggcagccacacaatggtaa
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