KEGG   Xenorhabdus nematophila AN6/1: XNC2_0016
Entry
XNC2_0016         CDS       T03752                                 
Symbol
hsdR
Name
(GenBank) Type I site-specific deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
xnm  Xenorhabdus nematophila AN6/1
Brite
KEGG Orthology (KO) [BR:xnm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xnm02048]
    XNC2_0016 (hsdR)
Enzymes [BR:xnm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     XNC2_0016 (hsdR)
Prokaryotic defense system [BR:xnm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   XNC2_0016 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD
Other DBs
NCBI-ProteinID: CEK21023
LinkDB
Position
I:complement(16057..19146)
AA seq 1029 aa
MSTVGQRERVTQDRIVKFFQTELGYRYLGNLQDRDNKNIDVDILTAWLKKQGISGTLIGR
VLRQLINTAALGDGNKLYYANKDVYNLLRYGIKEKEDVGEQHQTIWLINWHNPEANDFAI
AEEVSIKGENKKRPDIVLYVNGIALGIIELKRSSVSVSEGIRQNLDNQKKEFIRDFFSTM
QLVMAGNDTQGLRYGTIGTPEKYYLEWKEGIDNPYPYRLDFHLSRICSKPRFLQLIHDFI
VFDAGVKKACRHNQFFGVEAAKKRIFQREGGIIWHTQGSGKSLTMVWLAKWIRENVPNSR
VLIVTDRTELDAQIEKVFTGVEENIYRTKSGADLIFNLNRPNPWLICSLVHKFGHRSEAE
DDAATDEYIKELKKSLPSDFRAKGDLFVFVDECHRTQSGKLHDAMKSILPEAVFIGFTGT
PLMKKDKKKSIEVFGSFIHTYKFDEAVSDGVILDLRYEARDIDQYLTSQKRIDEWFEANT
QGLSRLGKTQLKQKWGTMQKVLSSKSRLEMIVMDIRLDMMKRPRLMDGRGNAMLVCSSIH
QACTVYDLFSQTDLAGKVAIITSYKPDSASIKGEETGEGLTEQLAKYKTYRKMLADYFEQ
PEDKVANRVEEFETKVKQQFIDEPGQMRLLIVVDKLLTGFDAPSATYLYIDKHMSDHNLF
QAICRVNRLDGDDKEYGYIIDYKDLFRSLNKAISDYTKEVFDGYDKKDIDGLLKNRLEQA
RLNLDAALEMVRALCEPVKAPRNTVDYIHYFCCESGADPELLSEKEALRLALYQCVAKLL
RAFANIANEMTIAGYSPAQMEKIRAEVAHYEKVRDEIKLASKDKVEMKRYEPAMRSLIDM
YIRADDSEVLMDFEEIGLLELIIQKGAAAGEDLPEGIRKDPEAMAETIENNVRKTIVDEN
PVNPRYYEHMSVLLDELIALRRQNALNYQEYLEKIRDLAKKVVRPNQNTAAYPPDIDTPP
KRAFYDNFDQNTDLAICIDKTIRDTKKADWVNDRFKEREIANALRDETAEYKVDIDKIME
LAKTQRDYR
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgagcaccgtaggccagcgcgaacgcgtaactcaagatcgcattgtcaaatttttccag
acggaattaggttatcgttatctgggaaatttacaggacagagacaataagaatattgac
gtagatatactgactgcatggttaaaaaagcagggaatcagtggaacattgattggccgt
gtgttgcgtcagttgattaataccgccgcgctgggcgatgggaataagctctattatgcc
aataaagatgtctataatttgttgcgctatggcattaaagaaaaagaagatgtgggtgag
cagcatcagactatttggttgattaactggcacaacccagaagccaatgattttgccatt
gctgaagaagtctccattaaaggagaaaataaaaaacggccagatatcgtcctgtatgta
aatggcattgctttgggaattatcgaactgaagcgttcaagtgtctccgtttcagaaggt
attcgtcagaatctggataaccagaaaaaagagttcatccgtgactttttcagcaccatg
caactggtgatggcagggaatgacacacaagggttacgctacggtactattggtacacct
gaaaaatattatctggaatggaaagaagggatcgataacccttacccctatcgtttggat
tttcacctcagccgaatttgcagcaaaccacgttttctacaattaattcacgattttatt
gtgtttgatgcaggcgttaaaaaagcttgtcgtcataatcaattttttggtgttgaggct
gcaaaaaaacgtattttccaacgcgaaggtggcattatttggcatacacaaggttcagga
aaaagcctgactatggtttggctggcaaaatggatacgggaaaatgtgccaaatagccgc
gtgttgattgtcaccgaccgcactgaattggatgcacagatcgaaaaagtttttactggg
gtagaagaaaatatttatcgcactaaaagtggtgccgatctgattttcaatcttaatcgg
ccaaatccgtggctgatttgttctttagtacataaatttggtcatcggtctgaagcagaa
gacgatgcggcaacggatgaatacatcaaagaactcaaaaaatcattgccgagtgatttc
agagcgaaaggtgatctgtttgtatttgttgatgaatgtcaccggactcaatccggtaaa
ttgcatgatgcgatgaaatctatattaccggaagccgtgtttattggttttaccggtaca
cctttaatgaaaaaagacaagaaaaaatccattgaagtatttggtagttttattcataca
tataagttcgatgaagctgtttctgatggcgtaatactggatttgcgttatgaagcccgt
gatattgatcagtatctgacttcgcaaaaaagaatcgacgaatggtttgaagctaataca
caaggattgtcccgtttgggcaaaacccagttgaagcagaaatggggaacaatgcagaag
gttctttccagtaaatcacgtttggaaatgatcgttatggatatcaggttggatatgatg
aaacgtccacgcctgatggatggacgaggaaatgccatgttggtttgctccagcattcat
caagcttgtaccgtttacgatttgttcagccaaacagaccttgctgggaaagtagcaatt
atcaccagctataagccagactctgcaagtattaaaggagaagaaacgggagaaggcctg
acagagcagctagctaaatataaaacttatcgtaaaatgctggctgattattttgaacaa
ccagaagataaagttgctaaccgggttgaagagtttgaaacgaaagtaaaacagcaattt
attgatgagccaggacaaatgcgtttacttatcgtggtagataaattgctgacaggtttt
gatgcgccttccgcgacttatctttatattgataaacacatgtctgaccataatttattc
caggccatttgccgagttaaccgtctggatggagatgacaaagaatatggctatattatt
gattataaagatttgttccgttccctgaataaagcgatatccgattataccaaagaggta
tttgacggatacgacaagaaggatatcgatgggctgttgaaaaatcgtctggaacaagcc
agattaaatctggatgcggcattggagatggttagagcgttatgtgaaccagttaaagct
ccacgtaacacggtagattatattcactatttttgctgtgaatcgggagctgatcctgaa
ttgctgtctgaaaaagaagcgttacgtttggcactatatcagtgtgtagcaaagctgttg
cgtgctttcgcaaatattgccaatgaaatgaccattgctggatattctcctgcacagatg
gagaaaatccgtgcagaagtagctcattatgaaaaagtacgtgacgagattaaactcgcc
agcaaagataaggttgaaatgaaacgttacgaaccggcgatgcgtagtcttatagatatg
tatatccgggcggacgacagtgaagttctcatggattttgaagaaattggtcttttggaa
cttattattcagaaaggtgcggcagcgggagaggatttacctgagggaatacgtaaagat
cccgaggcgatggcagaaacaatagaaaataacgtacgtaaaacgattgttgatgagaac
cctgttaacccgagatattacgaacatatgtctgttttgctggatgaattgatcgcttta
cgtcgtcaaaatgcactaaactatcaggaatatctggaaaaaatccgtgatctcgctaaa
aaggttgttcgcccgaatcagaacactgccgcctacccacctgatattgatacccctcct
aaacgggcgttttatgataatttcgatcagaatacggatctggctatctgcattgacaaa
acaatacgtgatacgaaaaaagcagattgggtaaatgacagatttaaagaacgtgaaatc
gcgaatgcacttcgtgacgaaactgccgaatataaagtggatattgataagataatggaa
cttgctaaaacgcagagagactaccgctga

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