KEGG   Xenorhabdus nematophila AN6/1: XNC2_0402
Entry
XNC2_0402         CDS       T03752                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
xnm  Xenorhabdus nematophila AN6/1
Pathway
xnm00300  Lysine biosynthesis
xnm00470  D-Amino acid metabolism
xnm01100  Metabolic pathways
xnm01110  Biosynthesis of secondary metabolites
xnm01120  Microbial metabolism in diverse environments
xnm01230  Biosynthesis of amino acids
Module
xnm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:xnm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    XNC2_0402 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    XNC2_0402 (dapF)
Enzymes [BR:xnm01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     XNC2_0402 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: CEK21401
LinkDB
Position
I:342771..343595
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLADRNTGIGFDQLLVVEAPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIKVSTRSGQMVLSVTNDDQIRVNMGE
PDFEPQRVPFRANKAEKTYIIRAVERTVLCGVVAMGNPHCVIQVEDVNTADVEVLGPALE
NHERFPERVNVGFMQIMNRGHIRLRVFERGAGETRACGSGACAAVAVGIQQDLLDNQVSV
DLPGGSLQIRWDGPGKPLFMTGPATHVYDGMIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtcttggcaatgactttatggtcgttgatgcagtaacc
cagaatgtttatttttctcctgagttaatctgccgtttggctgacaggaacacgggaatc
ggttttgatcagcttctggttgttgaggcaccctatgatcctgacctagacttccactat
cgcatttttaatgctgatggcagcgaagtttcccaatgcggtaacggagcacgctgtttt
gcccgttttgttcgtcttaaggggttgacgaataaacgcgatatcaaggtcagtacacga
tcaggtcagatggttttgagtgtcacaaatgatgatcaaatccgtgtcaacatgggcgag
ccagattttgaaccgcagcgtgttccttttcgggccaataaggctgaaaaaacctatatc
atccgtgctgttgaacgtacggtgctttgcggtgtggtggcaatgggcaatccccattgt
gtcatacaggttgaggatgtgaacactgccgacgtggaagttctgggaccggcgttggaa
aatcatgaacgttttcctgaacgggtgaatgtaggtttcatgcagataatgaatcgaggt
catattcggttgcgagtcttcgagcgtggtgctggcgagacacgggcctgtggtagtggt
gcctgtgcggcagtggctgtcggcattcagcaagatctgctggataatcaggtgagcgtg
gatcttcccggcggctctctgcaaattcgttgggatgggccgggtaaaccgctctttatg
actgggcctgcaacccacgtttatgacggcatgattcatttgtga

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