Xenorhabdus nematophila AN6/1: XNC2_0402
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Entry
XNC2_0402 CDS
T03752
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Pathway
xnm00300
Lysine biosynthesis
xnm00470
D-Amino acid metabolism
xnm01100
Metabolic pathways
xnm01110
Biosynthesis of secondary metabolites
xnm01120
Microbial metabolism in diverse environments
xnm01230
Biosynthesis of amino acids
Module
xnm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XNC2_0402 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XNC2_0402 (dapF)
Enzymes [BR:
xnm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XNC2_0402 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CEK21401
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Position
I:342771..343595
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLADRNTGIGFDQLLVVEAPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIKVSTRSGQMVLSVTNDDQIRVNMGE
PDFEPQRVPFRANKAEKTYIIRAVERTVLCGVVAMGNPHCVIQVEDVNTADVEVLGPALE
NHERFPERVNVGFMQIMNRGHIRLRVFERGAGETRACGSGACAAVAVGIQQDLLDNQVSV
DLPGGSLQIRWDGPGKPLFMTGPATHVYDGMIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtcttggcaatgactttatggtcgttgatgcagtaacc
cagaatgtttatttttctcctgagttaatctgccgtttggctgacaggaacacgggaatc
ggttttgatcagcttctggttgttgaggcaccctatgatcctgacctagacttccactat
cgcatttttaatgctgatggcagcgaagtttcccaatgcggtaacggagcacgctgtttt
gcccgttttgttcgtcttaaggggttgacgaataaacgcgatatcaaggtcagtacacga
tcaggtcagatggttttgagtgtcacaaatgatgatcaaatccgtgtcaacatgggcgag
ccagattttgaaccgcagcgtgttccttttcgggccaataaggctgaaaaaacctatatc
atccgtgctgttgaacgtacggtgctttgcggtgtggtggcaatgggcaatccccattgt
gtcatacaggttgaggatgtgaacactgccgacgtggaagttctgggaccggcgttggaa
aatcatgaacgttttcctgaacgggtgaatgtaggtttcatgcagataatgaatcgaggt
catattcggttgcgagtcttcgagcgtggtgctggcgagacacgggcctgtggtagtggt
gcctgtgcggcagtggctgtcggcattcagcaagatctgctggataatcaggtgagcgtg
gatcttcccggcggctctctgcaaattcgttgggatgggccgggtaaaccgctctttatg
actgggcctgcaacccacgtttatgacggcatgattcatttgtga
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