Xenorhabdus nematophila AN6/1: XNC2_0496
Help
Entry
XNC2_0496 CDS
T03752
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase, has polyadenylase activity
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Pathway
xnm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XNC2_0496 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xnm03019
]
XNC2_0496 (pnp)
03016 Transfer RNA biogenesis [BR:
xnm03016
]
XNC2_0496 (pnp)
Enzymes [BR:
xnm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
XNC2_0496 (pnp)
Messenger RNA biogenesis [BR:
xnm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XNC2_0496 (pnp)
Transfer RNA biogenesis [BR:
xnm03016
]
Prokaryotic type
tRNA degradation factors
XNC2_0496 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
OB_PDCD11
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
CEK21495
LinkDB
All DBs
Position
I:439985..442123
Genome browser
AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTIETGMMARQATAAVMVNMDDTAVFVTVVGQKKMKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPGEGETLVARLIDRPLRPLFPEGFLNEVQIIATVVSV
NPQVNPDIVAMIGASAALALSGIPFNGPIGAARVGYINDQYVLNPTSDELKNSRLDLVVA
GTESAVLMVESEAELLTEDQMLGAVVFGHEQQQIVIENINSLAAEAGKEKWDWAPEPINQ
SLHDRVAELAESRLGDAYRITEKQERYAQVNIIKEEVSVVILAESAEKGVELEEGEVLDA
LSGLEKNVVRGRVLSGEPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVAATL
GTERDAQVIDELMGERTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMP
NASEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFV
VLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITREIMQIALNQAKGARLHILSV
MEQAIESPRNDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVK
IAATDGDKARHAISRIEEITAEVEVGRIYTGKVTRIVDFGAFVAIGGGKEGLVHISQIAD
KRVEKVTDYLQVGQEVPVKVLEIDRQGRIRLSMKEAVATTDEAPQSPESSVE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgattgttcgtaaattccagtatggtcagcacacagtgaccatcgaaacc
ggcatgatggctcgtcaggcgacggcagctgttatggtaaatatggatgacaccgcggta
tttgttaccgttgttggtcagaaaaaaatgaagccgggtcaggatttctttcccctgact
gttaactatcaggagcgtacttacgctgccggccgtattccgggaagtttcttccgtcgt
gaaggccgtccaggcgaaggtgaaaccttagttgcccgcttgatcgaccgtcctctgcgc
cctctgtttccagaaggtttcctgaacgaagttcaaattatcgcaacagttgtttctgtt
aacccacaggttaaccctgatatcgttgctatgattggtgcatctgctgcactggcatta
tctggcattccattcaatggcccaatcggtgctgcgcgtgtgggttatatcaatgaccag
tacgtattgaacccaaccagcgacgaattgaaaaacagccgtttggatctggttgttgcg
ggaacagaaagtgcggtattgatggttgagtctgaagcagagctactgaccgaagatcaa
atgctgggtgccgttgtgtttggtcacgagcagcaacagattgttattgaaaatatcaat
tccttggctgctgaagcaggtaaagaaaaatgggattgggcaccagagcctatcaaccag
tcactgcatgatcgtgttgctgaattggctgaaagccgtttgggtgatgcttaccgcatt
actgagaagcaagagcgctatgctcaggttaacatcatcaaagaagaagtttctgtagtt
attctggcagaatctgcggaaaagggtgttgaactggaagaaggcgaagtacttgatgct
ctgtctggtctggagaaaaacgttgttcgtggtcgtgttctgagtggcgaacctcgtatc
gacggccgtgaaaaagacatggtacgtgctctggacgttcgtactggtgtgctgccacgt
acccacggttcatccctgtttactcgtggcgaaactcaggctctggttgctgcaactctg
ggcactgagcgtgatgctcaggttatcgatgaactgatgggcgagcgcactgaccgcttc
ctgttccattataacttccctccatactctgtaggtgaaacaggtatggttggttctcca
aaacgtcgtgaaatcggtcatggtcgtctggcgaaacgcggtgtattggccgtgatgcca
aacgccagcgaattcccgtataccgttcgtgtagtatctgaaatcactgaatccaacggt
tcttcttctatggcttccgtctgtggtgcatcattggctctgatggatgcaggtgtgcca
attaaggcagcggttgccggtattgctatgggtctggtgaaagaaggggataacttcgtt
gttctgtctgatattctgggtgacgaagatcatctgggtgacatggactttaaagttgcg
ggtagccgtgatggtatcagtgcattgcagatggatatcaagattgaaggcattacccgt
gaaatcatgcagattgccctgaatcaagccaaaggtgcccgtttgcacattctgagcgtg
atggagcaggcaattgaaagcccacgtaatgatatctccgaatttgcaccacgcattcat
accatcaagatcaatccggacaagatcaaagatgtgatcggtaaaggtggttctgtgatc
cgcgcattgacagaagaaaccggcactaccattgaaattgaagatgatggtactgtgaag
attgcagcaactgatggtgacaaagcacgtcatgctatcagtcgtatcgaagaaatcacg
gctgaagttgaagtgggtcgtatttataccggtaaagtgacgcgtattgttgatttcggt
gcgtttgttgctatcggcggtggtaaagaagggctggtgcacatttctcagatcgcggac
aaacgtgtagagaaagtgaccgattacctgcaagttggacaagaagttcctgtgaaagtg
ctggaaattgaccgtcagggtcgtattcgtttgagcatgaaagaagcagtagcgactacc
gatgaagcaccgcaatcaccagaatcatcagtagaataa
DBGET
integrated database retrieval system
