Xenorhabdus nematophila AN6/1: XNC2_0623
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Entry
XNC2_0623 CDS
T03752
Symbol
frdB
Name
(GenBank) fumarate reductase, anaerobic, Fe-S subunit
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Pathway
xnm00020
Citrate cycle (TCA cycle)
xnm00190
Oxidative phosphorylation
xnm00620
Pyruvate metabolism
xnm00650
Butanoate metabolism
xnm00720
Other carbon fixation pathways
xnm01100
Metabolic pathways
xnm01110
Biosynthesis of secondary metabolites
xnm01120
Microbial metabolism in diverse environments
xnm01200
Carbon metabolism
xnm02020
Two-component system
Module
xnm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xnm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xnm_M00150
Fumarate reductase, prokaryotes
xnm_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XNC2_0623 (frdB)
00620 Pyruvate metabolism
XNC2_0623 (frdB)
00650 Butanoate metabolism
XNC2_0623 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
XNC2_0623 (frdB)
00720 Other carbon fixation pathways
XNC2_0623 (frdB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XNC2_0623 (frdB)
Enzymes [BR:
xnm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XNC2_0623 (frdB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_9
Fer4_17
Fer4_7
Fer4_16
Fer4
Fer4_18
Fer4_2
Fer4_4
Fer4_21
Fer2
Fer4_6
Fer4_3
RTG2_C
Motif
Other DBs
NCBI-ProteinID:
CEK21619
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All DBs
Position
I:complement(550093..550827)
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AA seq
244 aa
AA seq
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MTEMKNLTMEVMRYNPETDSKPHFVTYEVPYDEQTSLLDALGYIKDNLAPDLSYRWSCRM
AICGSCGMMVNRVPKLACKIFLRDYAQGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY
IIGNDRKPADGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAVTLAHRY
NLDNRDNGKKERMPHINSDNGVWSCTFVGYCSEVCPKHVDPAGAIQQSKAESAKDFLISM
LKPQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatgaaaaatctgacaatggaagtcatgcgctataatccggaaactgatagt
aaacctcattttgtcacttatgaagtgccttatgatgagcaaacctcactgctggatgcg
ttgggctacattaaggataatctggcacctgatctttcctatcgctggtcttgccgcatg
gcaatctgtggttcctgcggcatgatggtgaaccgtgtacccaaattagcctgtaaaatc
ttcctgcgggattatgcgcaaggaatgaaagtcgaagcgctgggtaatttcccgattgaa
cgtgacttggttgtggatatgacccacttcattgagagccttgaagccatcaagccttat
attatcggtaatgatcgcaaaccggctgatggccccaatgtgcagacacccgcccagatg
gcaaaatatcatcagttttcgggctgtatcaactgtgggctgtgctatgcggcctgccct
cagtttggtttgaatcctgaatttatcgggcctgcggcggtcacactggcgcatcgctac
aaccttgataaccgcgataacggcaagaaagaacgtatgccgcacatcaacagtgataac
ggagtctggtcttgtacttttgtgggctattgctctgaagtttgcccgaaacatgtcgat
ccggctggtgccattcaacaaagcaaggcagaaagtgccaaagattttcttatctctatg
ctgaaaccacaataa
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