Xenorhabdus nematophila AN6/1: XNC2_1340
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Entry
XNC2_1340 CDS
T03752
Name
(GenBank) RTX toxin ABC transporter
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
xnm
Xenorhabdus nematophila AN6/1
Pathway
xnm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XNC2_1340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xnm02000
]
XNC2_1340
02044 Secretion system [BR:
xnm02044
]
XNC2_1340
Transporters [BR:
xnm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XNC2_1340
Secretion system [BR:
xnm02044
]
Type I secretion system
RTX toxin transporter
XNC2_1340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
DUF87
AAA_22
AAA_18
AAA_29
ABC_ATPase
nSTAND3
AAA_5
TMEM208_SND2
RsgA_GTPase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
CEK22334
LinkDB
All DBs
Position
I:complement(1237604..1239709)
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AA seq
701 aa
AA seq
DB search
MNEIEKKTISLINLIIMIANRNQAPTLNENLSNSDDYISALNKLKKEYNINIRIKHSINK
KLGSISLPAILFNHDGEPFILAKYDEQRVLIQKPYQETPEIIDKAEFINLWSGRWIKIKQ
KNSQFNIRWFIPEFVSQKKNLTEILLFSFILQILALISPLVVQVVMDKVLVHQALSTLDV
LIFGLVIAGLIEVLLRGLREYQYAHTANRIDIKLGLKLVQHLFGLPLLYFKSRQVGAIVT
RVRELETIREFLTGSMFTLSIDVLFMFVFIYVMSLLSGTLTLIFLLTIPFYALLAWWVTP
KIEKAVEKQFTHSAINTSFLTETIAGAETLKSLAAEPRFIRRWDDQTEKMVSTSYDVQQW
DNRASHLVMMLQKVTSAVIIWLGASEVLSLHMTIGQLIAFNMMVSHTQQPLAKLVQLWGQ
FIRSRIAIDKLGDMLNLPTEQQSGKEHVTLQGAILFSNIVFRYQPDLSPTINQFSLDIRA
GETIGIVGTSGSGKSTLARLLLRLYTPEKGTIMLDGIPLQQLNIESIRQQIGIVLQENFL
FNKTVYENLSQSFPDAPLSAVIEAAKLAGAHDFILKMPMGYDTVIAEGGQSLSGGQRQRL
AIARTLLSDPKILILDEATSALDDESQAIIQSNMADISQGRTVITIAHRLSTVRQCDRII
VLHQGQIIEQGSHDQLLQQGKHYRKLWQLQQELKQEKPSYA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatagaaaaaaaaacaatatcattaattaatttaataataatgatagctaat
agaaatcaagcccctacccttaatgaaaacttaagtaacagtgatgattatatttctgcc
ctaaacaagctgaaaaaagaatacaatattaatatcagaattaaacactctataaataag
aagttaggttctatatccttaccggccattttatttaatcatgatggagaacctttcatt
ctggcaaaatatgatgaacaacgcgtattaattcaaaaaccttatcaggaaacacctgag
ataatagataaagcagaatttatcaatctatggagcgggcgctggataaaaattaaacaa
aaaaacagccaatttaatattcgctggtttattcctgagtttgtcagccaaaaaaagaac
ctcacggagatactgctgttttctttcattctccagatattggcgctgatttctcctctg
gtcgtacaggttgtcatggacaaggttctcgtccatcaagcactttcaacattggatgtc
ctgattttcggactcgtgattgccggtttgattgaggtactcctgcgaggactacgcgaa
tatcagtatgcccacacggccaatcggattgacataaaactcggattgaagctggtacaa
catttgttcggcctgccgttgctgtattttaaatcccgacaggtgggcgcaattgtcacg
cgggtcagagagctggaaactatccgggaattcctgactggctctatgttcacactgagt
atcgatgtgctgttcatgtttgtcttcatttacgtcatgagcctgctctccggtacgctt
accctgatttttctgcttaccattccattttatgccctgctggcctggtgggttacgccg
aaaattgaaaaagcagtggaaaaacaatttacacattcagcaatcaatacctcttttctg
accgaaacgatagcaggcgctgaaacgctgaaaagtcttgcagctgaaccccgctttatc
cgacgctgggatgaccagaccgaaaagatggtcagtaccagctatgatgtacagcagtgg
gataatcgtgccagccacctggtcatgatgttacagaaagtcaccagtgccgtgattatc
tggcttggtgcttcagaagtactttccctgcatatgaccatcggtcaattgattgcgttc
aatatgatggtcagccatacccaacaaccactggctaagctggtgcagctctgggggcaa
tttatccgttcgcgcatcgccattgataaattgggggatatgctgaatctgccgacagag
caacaatcaggcaaagagcatgttacgttgcagggagccattttattttccaatattgtt
ttccgttatcagcccgatttatcccccaccatcaaccagttctcgctggatattcgtgca
ggcgaaaccatcggcatcgtcggaacctcgggttcagggaaaagtacgctggcccgtttg
ctgctgcggctttataccccggaaaaaggcaccattatgctggatggcatcccattgcaa
cagcttaatattgaatctatcaggcaacagatcggtatcgtgctgcaagaaaacttcctg
ttcaataaaactgtctatgagaatttgtctcaatcattccctgatgctccgttatcagcc
gtgattgaagctgcgaagctggcaggagcccacgattttattctcaagatgccgatgggt
tatgacacggtgattgcagaaggcgggcaatctttatcaggcggtcagcggcaacgtctg
gccatcgccagaacgctgctgtctgatcccaagattctgatccttgatgaagccaccagc
gcactggatgacgaatcacaagccattatccaatccaatatggcagatatttcgcaaggc
cggacggttattaccatagctcatcggctctccacagtacgtcaatgtgaccggattatt
gtattgcaccagggtcaaatcattgagcaaggcagccatgaccagttgttacaacaaggt
aaacactaccgaaaactttggcagctacaacaagagctaaaacaggagaaaccttcctat
gcttaa
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