Xenorhabdus nematophila AN6/1: XNC2_3729
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Entry
XNC2_3729 CDS
T03752
Symbol
fadB
Name
(GenBank) multifunctional: 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal)
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Pathway
xnm00071
Fatty acid degradation
xnm00280
Valine, leucine and isoleucine degradation
xnm00310
Lysine degradation
xnm00362
Benzoate degradation
xnm00380
Tryptophan metabolism
xnm00410
beta-Alanine metabolism
xnm00640
Propanoate metabolism
xnm00650
Butanoate metabolism
xnm00907
Pinene, camphor and geraniol degradation
xnm00930
Caprolactam degradation
xnm01100
Metabolic pathways
xnm01110
Biosynthesis of secondary metabolites
xnm01120
Microbial metabolism in diverse environments
xnm01200
Carbon metabolism
xnm01212
Fatty acid metabolism
Module
xnm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XNC2_3729 (fadB)
00650 Butanoate metabolism
XNC2_3729 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XNC2_3729 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XNC2_3729 (fadB)
00310 Lysine degradation
XNC2_3729 (fadB)
00380 Tryptophan metabolism
XNC2_3729 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XNC2_3729 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XNC2_3729 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XNC2_3729 (fadB)
00930 Caprolactam degradation
XNC2_3729 (fadB)
Enzymes [BR:
xnm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XNC2_3729 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XNC2_3729 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XNC2_3729 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
XNC2_3729 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
CEK24720
LinkDB
All DBs
Position
I:3732304..3734490
Genome browser
AA seq
728 aa
AA seq
DB search
MLYLSDTIQVKWLKDGIAELIFNAPAEINKLDTKTVTSLDKAVAALEQQTELKGLLLRSE
KQAFIVGADITEFLSLFNAPTEELHELLNLANNIFNRIEDLPVPTVSAINGYALGGGCET
VLSTDFRIASPDVRIGLPETKLGIMPGFGGSVRLPRLIGTDNALEIITAGKDIGAEEALK
NGLVDAVVPAAKLVDSAVSILEQAIKGDLDWKAARQPKLMPLNLNEIERTMSFSVAKGMV
MKIAGPHYPAPITAVKAIEKAATLSRDEALKLESDSFVTLAHTPVARALVGIFLNDQYVK
GLAKKHLQAVTTPEHAAVLGAGIMGGGIAYQSARKGIPVLMKDINQKALDLGINEAAKLL
NKQFERGRLEAMKMAKILSSIQPSLSYAGIEQSQIVVEAVVENPKIKAAVLAETESHISD
ECILASNTSTIPITELANSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDKTISTVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFRQIDKIMEKEFGWPMGPAYL
LDVVGIDTAHHAQAVMAQGFPDRMSRDYRDAIDVLFENQRYGQKNGVGFYQYTQDKKGKP
KKEQDETTDQLLAGISQPKQAFTSEEIIARTMIPMINEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGVFRYLDTLGTAAYVKMAESYIHLGDLYQVPAGLKAKSESNESYYPAPAEL
AVNPGKKA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctaagtgacactattcaagtaaaatggctgaaagatggcattgcagaactg
atcttcaatgcaccagctgaaattaataaattagatacaaagacggtgacttcgctggat
aaagccgttgctgcccttgagcaacaaacagaactgaaagggttgttgttacgttctgaa
aaacaagcctttattgttggcgcagacatcacagaatttctatcattattcaacgcacca
acagaagaacttcacgaactactgaatcttgccaataatattttcaaccgtattgaagac
cttccagttcctacggtctctgccattaacggctatgctcttggtggtggttgtgaaaca
gtgctttctactgatttccgtatcgcctctcccgatgttcgtatcggattaccagaaacc
aaattgggcattatgcccggcttcggtggttctgtccgtctgccacgcttaattggtacg
gataacgctcttgaaattattactgcgggtaaagatatcggtgctgaagaagcattgaaa
aatggcttggttgatgctgttgttcctgctgcaaagctcgtggactctgctgtttcaatt
ctggaacaagccattaaaggtgatttagattggaaagcggcccgtcaacctaagctaatg
ccactgaatctcaatgagatcgaacgtactatgagctttagtgtggcaaaaggcatggta
atgaaaattgccggtcctcattatcctgcgccaatcactgcggttaaagccattgaaaaa
gcagcaacattaagccgcgatgaagcccttaaattagaatctgacagttttgttacactc
gctcatacccctgttgcccgtgctttagtcggcatcttcctgaatgaccaatatgtcaaa
gggctagccaaaaaacatttacaagcagtcacaacacctgaacatgcagcggtactcggt
gcagggatcatgggtggaggcattgcctatcaatctgctcgcaagggcatccctgtcctg
atgaaagacatcaatcaaaaggcgttggatttaggtatcaatgaagcggctaaattactg
aataagcaatttgaacgcggacgtttggaagccatgaagatggctaaaatcttgtcatcc
attcagccaagcctcagctatgctggcattgaacaatcccagattgttgtcgaagctgtc
gttgaaaatcccaaaattaaggctgctgttttagcagaaacagagtctcatatcagcgat
gagtgcattctggcgtctaatacctccacaattccaatcaccgaattagcaaactcgctg
aaacgcccagaaaatttctgtggaatgcattttttcaatccagtacatcgtatgccactg
gttgaaattattcgtggagaaaagacatcagataaaaccatttcaacggttgtcgcttac
gccagcaaaatgggtaagacaccgattgtcgtcaatgactgccctggcttctttgtaaac
cgcgtcttgttcccgtatttggctggttttggcatgttagtccgtgatggcggtgatttt
cgtcaaatcgacaaaatcatggaaaaagagtttggctggccaatgggccctgcttatctc
cttgatgttgtcggtattgatacagctcaccatgcacaggctgttatggcgcaaggcttc
cctgatcgtatgagccgagattatcgggatgccattgacgtattattcgaaaatcaacgt
tatggccagaaaaatggtgttggtttctatcaatatacccaagataaaaaaggcaaaccg
aaaaaagagcaggatgaaactaccgatcaactcttggcaggcatcagtcaaccaaaacag
gctttcaccagtgaagagatcattgcgcgtaccatgatcccaatgattaacgaagtcgtt
cgttgtttggaagaaggtatcattgccagcccagcggaagcagatatggcgctggtttat
ggtttaggcttccctccattccacggcggtgttttccgttatctggataccttggggact
gcggcctatgtgaagatggctgaaagttatatccacttgggtgatctctatcaagtacct
gctggcctgaaagcaaaatccgaaagcaatgaaagttattaccctgccccagcagaactt
gctgttaatccaggcaaaaaagcgtga
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