Xenorhabdus nematophila AN6/1: XNC2_3892
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Entry
XNC2_3892 CDS
T03752
Symbol
recC
Name
(GenBank) exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Pathway
xnm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XNC2_3892 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xnm03400
]
XNC2_3892 (recC)
Enzymes [BR:
xnm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XNC2_3892 (recC)
DNA repair and recombination proteins [BR:
xnm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XNC2_3892 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CEK24879
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All DBs
Position
I:complement(3907014..3910421)
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AA seq
1135 aa
AA seq
DB search
MFRVYHSNQLDILKELMARLIEGNPLSNPFGKEVILVQSPGMSQWLQIQLAEKLGIAANI
EFPLPATFIWQMFTQVLLDVPKDGAFSKDAMKWKLMTLLPDLLAEPEFLALSHYLDQDID
KRKIHQLAGRIADLFDQYLVYRPKWLEKWENNQLVDGLSSNQLWQKRLWSELVEYTRQLQ
QPLWHRANLYQRFISALEEGNFPLENLPARIFICGISTLPPAYLQVFKTLGQHIDIHLMF
TNPCQYYWGDIQSYSFLTKLNSRKPKHYKNSQLLERFKDPENASSLFNEEGEQNLNNPLL
ASWGKLGRDNLYLLSQLEPDSDIHAFVELEPGCILHQIQRDILNLEDHAQIGSTENTFKN
SLKKRAVDRSDRSLTFHSCHSPQREIEVLQDQLLRLLDDDPSLTPRDIIVMMADIDNYAP
YIQAVFGNAPEDRYIPFAISDRKARQAHPVLQAFITLLDLPQSRFTAEQVLALLEIPALA
GKFAIHEEGLRLLRRWVKESGICWGLDDDNIEALSLPVTGQNTWHFGLTRMLLGYAMDSN
AGPWNDVLPYDESSGLAAELAGQLAEFLMELNRWRKILSEEQTLTDWLAVCPQLLETFFE
SDDETELVLALITQQWQKVIEHGLNAHYEGRVPLVLLRDELAFRFDDEKISQRFLAGSLN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTIPLLGFDLMAEKTQRGDRKRRDDDRYLFLEAL
ASAEQFLYISYIGKSIRDDTECNPSVLVNELLDYVCQSFCLAGDEMLNVDDSARNARQHL
LSQHTRVPFATENFLPDHDLQSYAAEWLPVATQQGGSATDFCQPIEFDHSEIKEVPLDEL
IRFYRHPVRAFFQQRLKVHFVIEEVELPEEEPFVLDNLQRYQFNQLLLSILIEKGCPEAL
FHHLRASGGLPHGAFGEIYWKAQLETMQPLADKVREELTVSSSIDLSEELESVILTGKIH
QVQPDGILRWRPANLTASDGIQLWIEHLAYCLSGGTSESRMYGTGGKEGKKSTECRFLPL
RHDEAKTHLNQMIEGYFQGMSEPLPLFCRSGWTWLESCFNQENREIDFSEETQQNAENKL
LEQWLGTNDRKGESCDHYIQRAFRHVDQSLLARIKRETQSYLLPMACYSNGSLFK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtttagagtttatcattcaaatcaacttgatatccttaaagagttgatggcgagattg
attgagggaaatcccctttctaacccatttggcaaagaagtgattttggttcaaagcccg
ggcatgtcccagtggttacaaattcagctggctgagaagttgggcattgccgcaaatata
gaatttccccttccggcgacctttatctggcaaatgttcactcaagtattgcttgatgtc
cccaaagacggtgctttcagcaaggacgccatgaaatggaaattaatgacgctgttgcct
gatttattggcagaaccggagtttctggcacttagccattatcttgatcaggatattgat
aaacgcaagattcatcaattggctggtcgaattgccgatctctttgaccaatacttggtt
tatcgcccgaaatggttagaaaaatgggagaataatcaattggttgatgggttaagcagc
aatcaattgtggcagaaaagattgtggtctgaattggtagaatatactcgccagttgcaa
caacccttgtggcatcgtgctaacttatatcaacgatttatctcagctttggaggaaggc
aattttccactggaaaatctgccggcacgtatttttatctgcggaatttccactttgccg
cctgcttatctgcaagtatttaagacgttagggcaacatattgatattcatctgatgttt
actaacccgtgccaatattattggggcgatatccaaagttattcattcctcaccaagtta
aatagccgtaaacctaaacactataagaacagccaactgctggagagatttaaagatccg
gagaatgcgtcatcgctttttaatgaagagggcgagcagaacctgaacaatccactcttg
gcatcctggggaaaattgggcagggataacctctatctgttgtcacaactggagccggat
tctgatattcacgcttttgttgaattggagcccgggtgtattttgcatcaaatccagcgg
gatattcttaatctcgaagatcatgctcagataggctcaacagaaaatacgtttaaaaat
agcctgaaaaagcgcgcagttgatcgttcagatcgctcgctgacctttcattcatgccat
agtccgcagagagaaatagaggtattgcaggatcagcttctgcgtttgctggatgatgac
ccttctctgacaccaagggacattattgtgatgatggcggatattgataactatgcacct
tatattcaggctgtttttggtaatgcgcctgaggatcgctatatcccctttgctatttct
gatcgtaaggcgcgtcaggcgcatcctgtcttacaagccttcattactttgctggatctg
ccacagagtcggtttaccgcggaacaagtgctggcactgttggaaatccctgctttagcc
ggcaaatttgcgattcacgaagaaggattgcgcctgctgcgtcgctgggtgaaagaatcc
ggcatctgttgggggctggatgatgacaacatcgaagcactgtctttaccggttacaggg
caaaatacctggcattttggcctgacacgcatgttactgggttacgcgatggacagtaat
gcaggcccgtggaatgacgtactgccttacgatgaatcgagtggtcttgccgccgaattg
gccggccagctggccgaatttttaatggagctgaaccgttggcgtaagattttgagtgaa
gaacagacattgactgattggctggcagtgtgtccgcaactgctggaaactttttttgag
tcggatgatgaaactgaacttgtattagcgctcatcactcaacaatggcaaaaagtgatt
gaacatggtttgaacgcacattatgagggcagggttcctttagtgctgctgcgtgatgag
ctggcttttcgttttgatgatgagaagataagccagcgttttctggctggctctctgaat
ttttgcactctgatgccgatgcgttctatcccgtttaaagttgtttgcctgctgggaatg
aatgacggggtttatccacgcaccattccactgcttgggtttgatctcatggcagaaaaa
acgcagcggggggatcgaaaacgacgtgatgatgaccgttatctttttttggaggcattg
gcttccgctgaacaattcctttatatcagctatatcggtaaatccattcgggatgatact
gagtgcaacccgtctgtgttagtcaatgagctcctggattatgtttgccagagtttttgc
cttgcaggtgatgaaatgctgaatgttgatgatagtgccagaaatgccagacaacatttg
ctttcacagcatacccgcgttccttttgcgacagaaaatttcctgcctgaccatgattta
caaagttatgcagcagaatggttacctgtggcaacgcagcaggggggttctgcgactgat
ttttgccagccgattgagtttgatcacagtgaaataaaagaagttccgctggatgaattg
atccgtttttatcgacatccggtcagggcatttttccagcaacggttaaaagtacatttt
gttattgaagaggtggagttacctgaagaagaaccttttgtactggataatctgcaacgt
tatcaatttaaccaactactgttgagcattttgatagaaaaagggtgccctgaagccttg
ttccaccatcttcgtgcatcgggtggcttgccgcatggtgcgtttggtgaaatctactgg
aaagcacaattagaaaccatgcagccattggcagataaggttcgtgaggagctgacagtc
tcttcttccatcgacttatctgaggaattagagagtgtgatattaaccggcaaaattcat
caggttcagcctgatggaattttacgttggcgcccggcgaacttaacggccagtgatggt
atccaattatggattgaacatcttgcctattgtctctcaggcggcaccagtgaaagccgc
atgtatggcacagggggaaaagagggtaaaaaaagtacagagtgtcgttttttaccgtta
aggcatgatgaagcgaaaacacatcttaatcagatgattgagggctattttcaaggtatg
tctgaaccgcttcccttgttttgccgaagtggctggacatggctggagagttgcttcaac
caggaaaatcgggaaatcgatttcagtgaggaaactcaacaaaatgctgaaaataaattg
ctggagcaatggctgggaacaaatgacagaaaaggagaaagctgtgatcattatatccag
agagctttccggcatgttgatcaatcacttttggcgcgtataaagcgcgaaactcagagc
tatttgctgccgatggcttgttattcaaatggctcgttattcaaatag
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