Xanthomonas oryzae pv. oryzae MAFF 311018: XOO0270
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Entry
XOO0270 CDS
T00360
Symbol
XOO0270
Name
(GenBank) formamidopyrimidine DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOO0270 (XOO0270)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO0270 (XOO0270)
Enzymes [BR:
xom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
XOO0270 (XOO0270)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XOO0270 (XOO0270)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XOO0270 (XOO0270)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BAE67025
UniProt:
Q2P8V2
LinkDB
All DBs
Position
300917..301732
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL
LIDTDAGGSALLHLGMSGSLRVLPGDTLPRAHDHVDISLQNGRVLRFNDPRRFGCLLWQS
DIQAHELLAALGPEPLSEAFTGDYLHALAYGRRAPVKTFLMDQAVVVGVGNIYAAESLHC
AGISPLREAGKVSLDRYRRLAAAVKDILSYAIRRGGTTLRDFISPDGAPGYFEQELTVYG
REGEPCKQCGRVLKHAMIGQRATVWCGSCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggttgaaacgacgctgcgtggcttgtcgccgcacctggttggg
caacgcatccatggcgtcatcctgcgtcgacctgatttgcgctggccgattcctgagcag
atagagcgtctgcttcccggcgccaccatcaccaatgtccgacgccgtgcgaaatactta
ctgatcgacacggatgcgggcggcagcgcattgctgcatttggggatgtccggaagcctg
cgggtgctacctggcgatacgttgccgcgggcgcatgaccacgtggatatcagtttgcaa
aatggacgcgtcctgcgcttcaacgatccacgtcgctttggctgtttgctgtggcaatcc
gacatccaggcgcatgaattactcgctgcgcttggtccagaaccattatcggaagcattt
actggcgattatctgcacgcgcttgcatatggtcggcgtgctcccgttaaaacctttctg
atggatcaggcagtggttgtcggcgttggcaatatctatgctgccgaaagcctgcattgc
gctggaatcagccctctgcgcgaggctggaaaggtatcactggatcgttataggcggctg
gctgcagcggtcaaggacatcctgtcgtacgccatccgacgcggcggtactaccttgcgt
gatttcattagcccggacggtgcgcccggttatttcgaacaggagcttaccgtctacggc
cgcgaaggcgagccctgcaaacaatgtggacgagtgttgaagcacgcgatgatcggccaa
cgcgccacggtgtggtgtgggagttgtcagcggtaa
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