Xanthomonas oryzae pv. oryzae MAFF 311018: XOO0811
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Entry
XOO0811 CDS
T00360
Symbol
XOO0811
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03030
DNA replication
xom03430
Mismatch repair
xom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XOO0811 (XOO0811)
03430 Mismatch repair
XOO0811 (XOO0811)
03440 Homologous recombination
XOO0811 (XOO0811)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xom03032
]
XOO0811 (XOO0811)
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO0811 (XOO0811)
Enzymes [BR:
xom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XOO0811 (XOO0811)
DNA replication proteins [BR:
xom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XOO0811 (XOO0811)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XOO0811 (XOO0811)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_22
AAA_16
TIP49
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAE67566
LinkDB
All DBs
Position
880349..881308
Genome browser
AA seq
319 aa
AA seq
DB search
MTAAFAPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASSPDPALA
QRTRQLIAAGTHPDLQLISFVPNRTGDKLRTEIVIEQVREISQKLALTPHDGIAQVVIVD
PADAINRSACNALLKTLEEPSPGRYLWLISAQPARLPATIRSRCQRLEFKLPPAHEALAW
LLSQGVSERAAQEGLDAARGHPGLAAQWLREDGLAVRRAVAQDLEQIASGRAGAVDVAQR
WTNDGQADQRLRHAADLVLAQASAGLTDPSRLHKLVTWFDAANRTRDLLRTTVRADLAVT
ELLLSWREGERQPRSRGTR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcatttgcaccctggcagcagcgtgccttcgaccagaccgtggccgcgctg
gatgcgggacggctcgggcatgggctgctgatctgcggcccggaaggtctgggcaagcgt
gccgtcgccctggccctggccgagcacgtgctggccagctcgccggacccggcactggcg
cagcgcacgcgccagttgatcgccgccggtacccatccggacctgcagctgatctcgttc
gttcccaatcgcaccggcgacaagctgcgcacggaaatcgtcatcgaacaggtgcgcgag
atttcgcagaagctcgcgctcacgccgcacgacggcattgcccaggtggtgatcgtcgac
ccggccgatgcgatcaatcgctcggcctgcaacgccttgctcaagaccctggaagaaccc
tcgcccggccgttacctgtggttgatcagtgcgcagccggcgcggctgccggcgaccatc
cgcagccgctgtcagcgcctggaattcaagctgccgcccgcgcacgaagcccttgcctgg
ctgctgtcgcaaggcgtgagcgagcgcgccgcgcaggaagggctggatgccgcgcgcggc
catcccggcctggcggcgcagtggttgcgcgaagacggcctggccgtgcggcgtgcggtt
gcgcaggatctggagcagattgccagtggccgcgccggcgcagtcgatgtcgcgcagcgc
tggaccaacgacggccaggccgatcaacgcctgcgccatgctgccgatctggtattggcg
caggcatctgccggcttgaccgatccatcgcggttgcacaagctggtgacctggttcgac
gccgccaaccgcacccgcgatctgctgcgcaccaccgtccgcgccgacctagcagtgacg
gaattattgctgtcctggcgcgagggagagcgccagccacgttctaggggaactcgatga
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