Xanthomonas oryzae pv. oryzae MAFF 311018: XOO0941
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Entry
XOO0941 CDS
T00360
Symbol
XOO0941
Name
(GenBank) DNA polymerase III epsilon chai
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03030
DNA replication
xom03430
Mismatch repair
xom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XOO0941 (XOO0941)
03430 Mismatch repair
XOO0941 (XOO0941)
03440 Homologous recombination
XOO0941 (XOO0941)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xom03032
]
XOO0941 (XOO0941)
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO0941 (XOO0941)
Enzymes [BR:
xom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XOO0941 (XOO0941)
DNA replication proteins [BR:
xom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XOO0941 (XOO0941)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XOO0941 (XOO0941)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BAE67696
LinkDB
All DBs
Position
1028523..1029257
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AA seq
244 aa
AA seq
DB search
MRQIILDTETTGLEWRKGNRVVEIGAVELLERRPSGNNFHRYLKPDCDFEPGAQEVTGLT
LEFLADKPLFGEVVEEFLAYIDGAELIIHNAAFDLGFLDNELALLGDHYGRIVERATVVD
TLMMARERYPGQRNSLDALCKRLGVDNSHRQLHGALLDAQILADVYIALTSGQEEIGFAS
ADAGQQTDAASGMIAFDPALLLPRPRVAVTASESQAHEARLVQLRKKAGRALWDPPVEEV
AVAG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatcattctcgataccgaaaccaccggcctggaatggcgcaagggcaaccgc
gtcgtcgaaatcggtgcggtggagctgctggagcggcgcccgagcggcaacaatttccat
cgctatctgaagcccgattgcgacttcgagcccggcgcgcaggaagtgaccgggctgacc
ctggaatttctggccgataaaccgttgttcggcgaggtggtggaggagtttctcgcctac
atcgacggcgcggaactgattatccataacgccgcgttcgacctggggtttctggacaac
gaactggcgctgctgggcgatcactacggtcgcatcgtcgagcgcgccacagtggtggat
accttgatgatggcgcgcgagcgctatccggggcaacgaaattccttggatgccttgtgc
aagcgtctgggcgtggacaactcgcatcgccagttgcacggcgcattgctcgatgcgcag
atcctggccgacgtgtatatcgcgctgacctcgggtcaggaggaaatcgggttcgccagc
gccgacgcaggccagcagaccgacgcagcgagcggcatgatcgcgttcgacccggcgctg
ctgttgccgcgtccgcgcgttgcggtgaccgcctccgaatcgcaggcgcacgaggcccgt
ctggtgcagctgcgtaaaaaggccgggcgtgcattgtgggatccgccggtcgaagaggtc
gctgttgctggctga
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integrated database retrieval system
