Xanthomonas oryzae pv. oryzae MAFF 311018: XOO0978
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Entry
XOO0978 CDS
T00360
Symbol
XOO0978
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XOO0978 (XOO0978)
Enzymes [BR:
xom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
XOO0978 (XOO0978)
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
Motif
Other DBs
NCBI-ProteinID:
BAE67733
LinkDB
All DBs
Position
complement(1068488..1070089)
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AA seq
533 aa
AA seq
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MPRHRLHTFACALLLYAGVSAPALAEFGCTRSGDRVIVDSGAELVFSVDTHDGDIVSMRY
RDNELQTTEPKGSQIASGLGSASVDARIAGGTIIVSAKAGDLIQYYIVRKGRNAIYMATY
APTLPPVGELRFVARLNVSKLPDAQQEPDSNVGTAIEGNDVFLLPDGRTSSKFYSARRMM
DDQVHGVSGPGVAVFMLMGNREHSAGGPFFKDIATQKTRVTHELYNYMYSDHTQTEAFRG
GLHGVYGLLFTDGSAPSDAQLNTDFVDATLGLSDYLPASGRGAVGGQVSGVLPDQPAVIG
LRNAQAQYWATADGSGEYQVTGVRPGRYRMTLYQNELEVAWRDIEVFANDTAHATLQAVA
LPGTLKWQIGIPDGTPAGFGYADLLPHAHPSDARMRWSATTYTVGSSGQSSFPAVQWRGI
NTPSRIDFTLAADEVRDYRLRIFVPLAQGSARPQISVNARWNGPMPDAPLQPKTRGITRG
TTRGNNALYEMDIPASALQAGSNCIEIGIASGSPDNGFLSPAIVFDSIQLVAL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcatcgcctgcacaccttcgcctgcgcgctgttgctctatgccggcgtcagc
gcacctgcactggccgaattcgggtgcacccgcagtggcgaccgcgtgattgtcgacagt
ggcgccgagctggtgttttcggtcgatacacacgatggcgatatcgtgtcgatgcgctat
cgcgacaacgaactgcagaccaccgaaccgaagggttcgcagatcgcttcggggctgggc
agcgccagcgtggacgcacgcatcgcgggtggaacgatcatcgtgtccgccaaggccggc
gatctgatccagtactacatcgtgcgcaagggccgcaacgcgatctacatggccacgtat
gcgccaacgttgccaccagtgggcgaattgcgcttcgtggcccgcttgaatgtgtccaag
ttgccggatgcgcagcaggaacccgattccaatgtcggcacagcgatcgaaggcaacgat
gtctttttgttgccggatgggcgcaccagttccaaattctattccgcacgccgaatgatg
gacgaccaggtgcatggcgtcagcggccccggcgttgcagtgttcatgctgatgggcaac
cgcgagcacagcgcgggtgggccgttcttcaaggacatcgccacgcaaaagactcgtgtg
acacatgaactctacaactacatgtattccgaccacacccagaccgaagcatttcgtggc
ggtctgcatggtgtgtacgggttgttgttcaccgatggcagcgcgccatccgatgcgcag
ctcaacaccgatttcgtcgatgccacgctgggtctgagcgattatttgccggcaagcggg
cgcggtgcagtcggcgggcaagtgagcggcgtgctgcccgaccagccagcagttatcggt
ctgcgcaacgcgcaggcgcaatactgggccaccgcggacggcagtggcgagtatcaggtg
acaggtgtgcgcccgggcagatatcgcatgacgctctaccagaacgaactggaagtcgca
tggcgcgatatcgaagtgtttgccaacgacacagcacacgccacacttcaggcggtcgcc
ttaccgggcacgctgaagtggcagatcggcattcccgatggcacgccggcggggttcgga
tacgcggacctgctaccgcatgcgcacccttccgatgcgcgcatgcgctggtctgcgacg
acgtacaccgtcgggtcgagcggccagagcagctttcccgcggtgcagtggcgcggtatc
aacaccccgagccggatcgacttcaccctggccgccgacgaggtacgcgactatcgcctg
cgcatcttcgtgccgttggcgcagggcagtgcacgcccgcagatcagcgtgaatgcccgc
tggaatgggccgatgcctgacgcccctctgcagccgaagacacgcggcatcacgcgcggc
acgacgcgtggcaacaacgccctgtacgagatggacattcccgcatctgctttgcaggcc
ggcagtaactgcatcgagatcggcattgcctccggctccccggacaacggcttcctcagc
ccggcaatcgtgtttgacagcatccaactggtggcgttgtag
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