Xanthomonas oryzae pv. oryzae MAFF 311018: XOO1048
Help
Entry
XOO1048 CDS
T00360
Symbol
XOO1048
Name
(GenBank) ATP-dependent DNA helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XOO1048 (XOO1048)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO1048 (XOO1048)
Enzymes [BR:
xom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XOO1048 (XOO1048)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
XOO1048 (XOO1048)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_dom3_C
RecG_wedge
ResIII
tRNA_anti-codon
HHH_5
IMS_HHH
Cas3-like_C_2
SNF2-rel_dom
SecA_DEAD
AAA_30
HHH
DNA_pol_lambd_f
IMS_HHH_1
Cdd1
RecR_HhH
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
BAE67803
LinkDB
All DBs
Position
1140160..1142313
Genome browser
AA seq
717 aa
AA seq
DB search
MPRARVVTPSLAVAGQAPLSSLPGVGPKVADKFAARGILSVQDLWLHLPLRYEDRTRLTT
IAQLQSGVPAQIEGRVDAVERGFRFRPVLRVAVSDASHGTLVLRFFHFRAAQVAQFAVGT
RVRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDSLDPVYPVLEGVGPATLRKLIGQAL
ERLPPEAALELLPPHWLQDEQLPSLRAALLTMHRPPVGTDPQQLLAGGHPAQQRLAIEEL
LAHQLSLRRQRIALQRFHAPSLPGNGTLVQQLRRALPFQLTGAQQRVFEQIARDLAQSWP
MLRLVQGDVGSGKTVVAALAAMLAVEQGKQVALAAPTELLAEQHLNNLRDWLEPLGIRIV
WLAGKVTGKARAAAMADVASGQAQVVVGTHALMQEAVVFHDLALAIIDEQHRFGVHQRLA
LRDKGAAAGSVPHQLVMTATPIPRTLAMSTYADLDVSAIDELPPGRTPVQTIVLSAERRP
ELVERIRAACAEGRQAYWVCTLIEESEEPEKGARGQHGGPPRIEAQAAEVTFEALSAQLP
GVRVALVHGRMKPAEKQQAMLDFKQGRSDLLVATTVIEVGVDVPNASLMIIENAERLGLA
QLHQLRGRVGRGADASSCVLLYQAPLSMMARQRLETMRQTNDGFVIAEKDLELRGPGELL
GTRQTGLASFRIADLARDAGLLPRVQVLAERLLEEVPEIADRVVARWIGGAVRYAAA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgcgcgcgtcgtcacaccgagcctggccgttgccggccaggctccgctgtcc
agcctgcctggtgtcggcccgaaagtggccgacaaattcgctgcgcgcggcatcctgagc
gtgcaggacctgtggctacatctgccgctgcgttacgaagaccgcacgcggctgaccacc
atcgcgcagctgcaaagtggcgtgccggcgcagattgaaggacgcgtggatgcggtagag
cgtggctttcgctttcggccggtcctgcgcgtggcagtgtcggacgcatcgcacggcacg
ctggtgctgcgcttcttccattttcgtgctgcgcaggtggcgcagttcgccgtcggcacg
cgtgtgcgcgtgttcggcacgcctaagcccggccagaacggctgggagatcgtgcacccc
agttatcgcgtgctcgcgccggatgaagatgccggtctgggcgatagtctggatccggtc
tatccggtgctcgaaggcgtcggcccggccacgttgcgcaagctcatcggccaggcgctg
gagcgtctaccacccgaagccgcgctggaattgctgccgccgcactggctgcaggacgag
caactgccatcgttacgcgcggcattgctgaccatgcatcgtccgccagtcggcactgat
ccgcagcaattgctcgccggaggccatccggcccagcagcgcctggccattgaagagctg
ttggcgcatcaactcagcctgcgccgccaacgcatcgcgctgcagcgtttccacgcgccc
agcctgccaggcaacggcacgttggtgcagcaattgcgcagggccttgccgtttcagctc
accggcgcgcagcagcgggtgttcgagcagatcgctcgcgaccttgcgcaatcctggccg
atgctgcggctggtgcagggcgatgtcggtagcggcaagaccgtggtcgccgcattggcg
gcgatgctcgcggttgagcagggcaagcaggtcgcactcgccgcgcccaccgaattgctt
gccgagcagcacctcaataatctgcgggattggctggagcccttgggcatccgcatcgtc
tggctggccggcaaggtcaccggtaaggcgcgtgctgcggcgatggccgacgtcgcctca
ggccaggcacaggtggtggtcggtacgcatgcgttgatgcaggaggcggtggtcttccac
gatctggcgttggccatcattgatgagcaacaccgcttcggcgtgcatcagcggcttgcg
ctgcgcgacaagggcgcggcggcgggcagtgtgccgcaccagctggtgatgacggctacg
cccatcccgcgtaccttggcgatgtcgacctatgcagatctggatgtctcggccatcgac
gaactgccgcctggtcgcacgccagtgcagacgatcgtgttgagtgcggagcgccgccct
gagttggtcgaacggatccgcgccgcctgcgccgaggggcgtcaggcgtattgggtatgc
acgctgatcgaagaaagcgaagagcccgaaaaaggggcgcgaggccaacatggcgggccg
ccacgcatcgaggcgcaagccgcggaagtcaccttcgaagcgttgtctgctcaattgccg
ggcgtgcgtgtggcgctagtgcacggtcgtatgaaaccggccgaaaaacagcaggccatg
ctggatttcaagcagggtcgcagcgatctgctggttgccaccaccgtgatcgaagtcggc
gtggacgtccccaatgcgtcgctgatgatcatcgaaaatgccgagcggctgggcctggcg
cagttgcaccagttgcgtggccgggtcgggcgcggtgcggacgcttccagctgcgtgctg
ttgtatcaagcgccgttgtcgatgatggcgcgtcagcgcctggagaccatgcgccagacc
aacgacggtttcgtgatcgcggaaaaggatctggaattgcgcggtccaggcgaattgcta
ggcacccggcaaaccggtctggccagtttccgcatcgccgatctggcccgcgatgccggc
ctgctgccacgcgtgcaggtgctggccgaacgactgctggaggaagtaccggagatcgcc
gaccgcgtggtcgcgcgctggatcggtggcgcggtgcggtatgcggccgcttga
DBGET
integrated database retrieval system
