Xanthomonas oryzae pv. oryzae MAFF 311018: XOO1799
Help
Entry
XOO1799 CDS
T00360
Symbol
XOO1799
Name
(GenBank) conserved hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xom03016
]
XOO1799 (XOO1799)
Enzymes [BR:
xom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
XOO1799 (XOO1799)
Transfer RNA biogenesis [BR:
xom03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
XOO1799 (XOO1799)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
BAE68554
LinkDB
All DBs
Position
1986076..1986678
Genome browser
AA seq
200 aa
AA seq
DB search
MKQQFLYLSSAQAQLSLGLGDEKTTERLFFAVMADAPTAEQAARIADSLLQGGHAEGKPL
ARERLHVTLHHLGDYAGGLPPSLVSRATQAAARVAMDAFAVEFDRVGTFGGRRSQLPCVL
RGEEQVRGLYALQGALGTQLAHVGIAGDAQYTPHMTLLYCNQAVPQRRCDALAWTVRDFA
LVRSFLGQSRYQIEGRWSLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacagttcctgtacctatcgtcggcccaagcgcagttgtcgcttgggcttggg
gatgagaagaccactgaacgcctgttttttgcggtgatggccgatgcgcccacggccgag
caggcggcgcggattgccgacagcctgctgcaaggcgggcacgcggaaggcaagccactt
gcgcgcgaacggctgcatgtgaccttgcatcatttgggcgattacgccggtggtttgccg
ccatcgttggtaagccgcgccactcaggccgcggcgcgcgtcgcaatggatgcgttcgca
gtggaattcgaccgcgtcggcaccttcggtggcaggcgctcgcaacttccctgcgtgttg
cgtggcgaagagcaggtacgtgggctctacgcgctgcaaggcgcattgggaacgcagctt
gcgcatgtcggtattgccggcgatgcgcagtacacgccacacatgacgctgctgtactgc
aatcaggcggtgccgcaacgacgctgcgatgcgcttgcctggacggtgcgcgactttgcg
ctggtgcgcagctttcttggccagtcgcgttatcagatcgaaggccgctggtcgctgcgc
tga
DBGET
integrated database retrieval system
