Xanthomonas oryzae pv. oryzae MAFF 311018: XOO1880
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Entry
XOO1880 CDS
T00360
Symbol
XOO1880
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom00300
Lysine biosynthesis
xom01100
Metabolic pathways
xom01120
Microbial metabolism in diverse environments
xom01230
Biosynthesis of amino acids
Module
xom_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XOO1880 (XOO1880)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xom01002
]
XOO1880 (XOO1880)
Enzymes [BR:
xom01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
XOO1880 (XOO1880)
Peptidases and inhibitors [BR:
xom01002
]
Metallo peptidases
Family M20
XOO1880 (XOO1880)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
BAE68635
UniProt:
Q2P492
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All DBs
Position
2071438..2072568
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AA seq
376 aa
AA seq
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MNDVLDLTCDLIARASVTPEDAGCQALLAGRLTAAGFACEHLRLGEVDNLWATHGSGAPV
LVLLGHTDVVPPGPREAWTSDPFDPQIRDGVLYGRGVADMKGSVAAFVVAAEQFVAAHRA
HAGTLAVLLTSDEEGDAIDGVRRVANLFLERGQAIDWCITGEPSSTERLGDLLRVGRRGS
LSGTLTVKGVQGHVAYPHKARNPIHLAAPALAELVARQWDDGFESFPPTSLQVSNIHAGT
GANNVIPGELQVAFNLRYTPHWDAPRLEAEITALLDRHALDYALRWHRSGEPFYTPEGRL
RSVAREVLGAFAGAPPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDEHVRVADLQ
ALPALYRTLIERLLIE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgtgctggatctgacctgcgatctgattgcacgcgcctcggtgactcccgag
gatgctggctgccaggcactgcttgcagggcgcttgactgccgcgggcttcgcctgcgaa
cacctgcgcctgggcgaggtcgacaatctgtgggcaacgcatggcagcggcgcgccggtg
ctggtgttgctggggcataccgatgtggtaccgccgggcccgcgcgaggcctggaccagc
gatccgttcgatccgcagatccgcgacggcgtgctgtacggtcgtggcgtggctgatatg
aaaggcagcgtcgccgcgttcgtcgtcgccgcggagcagttcgtcgccgcgcatcgagcg
catgccggcacgctggcagtgttgctgacttcggacgaggagggcgatgccatcgatggc
gtgcgccgggtcgccaacctctttctcgaacgcggacaggcgatcgattggtgcattacc
ggcgagccatcgtccaccgagcgcttgggcgatctgttgcgcgttggacgtcgcggcagc
ttgtccggcacgctcaccgtcaagggggtgcaggggcatgtggcgtacccacacaaggcg
cgcaacccgatccatctggcagcgcctgcgctggccgaactggtcgcgcggcaatgggac
gatggcttcgaaagcttcccgccgaccagtctgcaagtctccaatatccatgccggcact
ggcgccaataacgtgattcccggcgagctgcaggtggccttcaatctgcgctatacgccg
cactgggacgcgccgcgcctggaggcggaaatcaccgcgctgctcgatcggcatgcgctg
gactacgcgctgcgctggcaccgcagcggcgagccgttctacaccccggaagggcgcttg
cgtagcgtcgcgcgtgaggtgttgggcgcgtttgccggtgcgccaccggaagagagcacc
ggcggcggcacctccgacgcgcgcttcatcgcgccattgggcgcgcagtgcatcgaagtc
ggcccggtcaacgccagcattcatcaggtcgacgagcatgtgcgcgttgccgatctgcaa
gcactgccagcgctgtatcgcacactgatcgagcgcttgctgatcgagtga
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