Xanthomonas oryzae pv. oryzae MAFF 311018: XOO2307
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Entry
XOO2307 CDS
T00360
Symbol
XOO2307
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XOO2307 (XOO2307)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO2307 (XOO2307)
Enzymes [BR:
xom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
XOO2307 (XOO2307)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
XOO2307 (XOO2307)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XOO2307 (XOO2307)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XOO2307 (XOO2307)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAE69062
LinkDB
All DBs
Position
2568451..2569896
Genome browser
AA seq
481 aa
AA seq
DB search
MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMV
TAITPQHALREGVTEAEAFARIAEQMSRPQTCTLGYNSIRFDDEFVRCGLFRNFYDPYER
EWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLASANDVREGDAHEALSD
VYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQRYPASRLCAAAV
LPLTRHPRIDSRVIVFDLEGDPDVLLRLSPDEIADRLYIRAADLPEGERRIPLKEVHLNK
SPALVAWQHLRAADFERLGVDQDAVLAKAARMRELGPELAEKVRQVYGSERAPAAATNDA
DASLYDGFLAEGDKRLLAQVRTSAPAELCALESRFRDPRLIELLFRYRARNWPQTLSFDE
QERWNAYRRQRLLEDRGLGEVTLEQYNAQIVDLRRAHPDDATKQALLDQLAAWGLDLQRT
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacagctttctcttctacgacctggaaaccttcggccaggacccgcgccgcacc
cgcattgcacagttcgcagcggtgcggaccgacgcgcaactgcgcgtgatcgaagagccg
atcagcttctttgtgcagccggccgacgatctgctgccctcgccctacgccaccatggtg
accgctatcacgccgcagcacgcgctgcgcgaaggcgtcaccgaggccgaggcgttcgcg
cgcatcgccgaacagatgagccggccgcagacctgtacgctgggctacaactcgattcgc
ttcgacgacgagttcgtgcgctgcggcctgtttcgcaatttttacgacccctacgagcgc
gagtggcgcggcggaaactcgcgttgggatctgctggatgtgttgcggatggtgcatgcg
ctgcgtccggacggcatcgtctggccgcaacgcgaagatggcgccacctcgttcaagctg
gaacacctggccagtgccaacgatgtgcgcgaaggcgatgcgcacgaagcgctgtcggac
gtgtacgccaccatcggcatggcgcgcaagtttcagcagcatcagccaaaactgtgggac
tacgcgctgcgtctgcgcgacaagcgctttgccgccaccttgctggacgtcatcgccatg
cagccggtgctgcatatttcgcagcgctaccccgcctcgcgtctatgcgcggcggcggtg
ctgccgctgacacgccatccgcgcatcgacagccgcgtgatcgtgtttgatctggaaggc
gacccggacgtgctgttgcggctaagccccgacgaaattgccgaccgcctgtatattcgc
gccgcagatctgccggaaggcgagcggcgtattccactgaaagaagtgcatctgaacaag
tcgcccgcgctggtggcctggcagcatctacgcgctgcagattttgagcgcctgggcgtg
gatcaggatgcagtattggccaaggcggcacgcatgcgcgaattgggccccgaacttgcc
gaaaaggtacgccaggtttatggcagcgagcgcgcacctgcggcagcgaccaacgatgct
gacgcttcgctctacgatggctttctggccgaaggcgacaagcgtctgctggcgcaagtc
cgcaccagcgcaccggccgaactgtgcgcgttggagtcacgctttcgcgacccgcgcctg
atcgaactactgttccgctaccgcgcgcgcaactggccgcagacactgtcgttcgacgaa
caggagcgctggaacgcgtatcgccgccagcgcctgctcgaagatcgcggcctgggcgaa
gtgaccctggaacagtacaacgcgcagatcgtggatttacggcgtgctcaccccgacgat
gctaccaagcaagccctcctcgaccagctcgccgcctggggtttggacctccaacgcacg
ctatga
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