Xanthomonas oryzae pv. oryzae MAFF 311018: XOO3029
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Entry
XOO3029 CDS
T00360
Symbol
XOO3029
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XOO3029 (XOO3029)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO3029 (XOO3029)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XOO3029 (XOO3029)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XOO3029 (XOO3029)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
BAE69784
UniProt:
Q2P0Z3
LinkDB
All DBs
Position
complement(3433689..3435710)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQKPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQSKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESAGEVTELVVRPTGLID
PVVEIRPVGMQVDDLMSEIHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDESDRRREKQVEYNLEHGITPESVERPISDIMEGA
REDAAEKKSGKGRSKSRQVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKTASLA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttcagctcgtatccccatactcgccagcgggcgaccagcctgccgcc
atcgacaagttggtggccaactttgaggctgggctggccaaacagacgctgttgggggtg
accggttcgggcaagacctacaccattgctaacgtcgtccagcaggtgcagaagccgacc
ctggtaatggcgccgaacaagacgctggcggcgcagttgtatggcgagttcaagtcgttc
ttcccgcacaacgcggtggagtacttcgtcagctactacgactattaccagccagaggct
tacgtgccgtcgtcggacaccttcatcgagaaggacagttcgatcaacgaacacatcgag
cagatgcgtttgtcggcgaccaagaccttgctgtcgcggcgcgattcgctggtggtggcg
acggtgtcggcaatctatggcctcggcgcgccggaagactatttgtcgctgcgcctgatc
ctgtcgattggcgaacacatcgatcagcgtcagttgatccgtcatctcaccgacctgcag
tacacccgtaacgagttcgagctcacgcgcggcgcttttcgcgtgcgcggcgaggtgctg
gatgtgttccctgccgagtcggataccgaggccctgcgcatcgagttgttcgatggcgac
atcgagcagctgacgctgttcgatccgctcaccggcgagaccttgcgcaagctgcagcgc
tataccgtgtacccgaaaacgcattacgccacgacgcgtgagcgcacgttgagtgcggta
gacaccatcaaagaagagttgaaagagcggcttgagcagctctactcgcagagcaagttg
gtcgaggcgcagcgtctggcgcagcgcacgcagttcgatctggaaatgatggccgaagtg
ggtttctgcaacggtatcgaaaactactcgcggcatctcaccggcaaggcacccggcgag
ccgccgccgaccttgttcgattacctgccgccggacgcgctactggtcatcgacgaatcg
cacgtgaccattccgcagatcggcgcgatgtacaaaggcgaccgctcgcgcaaggaaacg
ctggtggagttcggcttccgcttgccgtctgcgctggataaccggccgctgcggttcgaa
gagtgggaagcgcgttcgccgcgcagcatttacgtgtcagcgacaccgggtccttacgag
ttgcgcgagtcggctggcgaggttacggagttggtggtgcgcccgactggcttgatcgac
ccggtagtggagatccgtccggtgggcatgcaggtcgatgacctcatgtcggagattcac
gaacgcatcaagctcggcgaccgcgtgctggtgaccacattgaccaagcgcatggccgaa
aacctcaccgagtacctgggcgagcatggcattcgggtgcgctatctgcactcggatatc
gacaccgtagagcgtgtggaaatcattcgcgacctgcgtctgggcaaattcgatgtgctc
gtcggcatcaatctgctgcgcgagggcttggacatgccggaagtgtcgctggtggcgatc
ctggatgccgacaaggaaggcttcctgcggtcgaccggttcgctgatccagaccattggg
cgcgccgcacgcaatttgcgcggcaaggccattttgtatgccgacaagatgacccgttcg
atgcaggcagcgatcgacgagagcgatcgccgccgtgaaaagcaggtcgagtacaacctg
gaacatggcatcacgcctgaatctgtcgagaggccgatctccgacatcatggaaggtgcg
cgcgaagatgcagccgagaagaagtcgggcaaggggcgttccaagtcgcgtcaggtcgct
gaggagacacccgattaccgcgccatgaaacccgcggaaatcgccggcaagctcaagagc
ctggagcagaagatgtatcagcacgcaaaggatcttgagttcgaggccgcagcgcaaata
cgcgaccagatccagaagctcaaaacggcaagcctggcctag
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integrated database retrieval system
