Xanthomonas oryzae pv. oryzae MAFF 311018: XOO3049
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Entry
XOO3049 CDS
T00360
Symbol
XOO3049
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xom03016
]
XOO3049 (XOO3049)
Enzymes [BR:
xom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XOO3049 (XOO3049)
Transfer RNA biogenesis [BR:
xom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XOO3049 (XOO3049)
Prokaryotic type
XOO3049 (XOO3049)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAE69804
UniProt:
Q2P0X3
LinkDB
All DBs
Position
complement(3458778..3459704)
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AA seq
308 aa
AA seq
DB search
MKPRIAYRPLHGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSAKAYDAEIVLGVTTDTDDADGEPLRERAVPDVSEADLQVALAAFIGRIQ
QQAPIYSALKQGGEPLYAKARRGEVIDAPVREVEVQAIEVLGYSAPRLTLRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRAPQMITLEGLATALEAGAEAQTVLLPIEAGL
ADFARIVLDAALAARFRMGQRLRDAAFPTGQVAVFGPDGSPSGLGLVDADGRLSPQRLFN
GLNEISVC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgcttaccgcccgttgcacggcatcctgttgctggacaagccggcc
gggctcagttccaacaatgcattgcaggccgcgcgccgcttattgcgtgcagagaaaggt
ggccataccggtagcctggacccgctggccaccggcctgctaccgctctgctttggcgaa
gccaccaagatcgccggactgctgctcgggtcggccaaggcgtacgacgccgagatcgtg
ctgggcgtcaccaccgataccgatgatgccgacggcgagccgctgcgcgaacgtgcggta
cccgacgtgagcgaggccgatctgcaggtggcgctggcggctttcatcggccgcatccag
cagcaggcgccgatctattccgcactcaagcaaggcggtgagccgctgtatgccaaggcg
cggcgtggcgaggtcattgacgcgccggtacgtgaggtcgaggtgcaggcgatcgaagtg
ctgggctacagcgcgccgcgtttgacgctgcgcgtgacctgcggttcggggacgtatatc
cgcagcctggcgcgcgatctcggcgaggtgctgggctgcggcgcgcatatcgcgtcgttg
cgtcgactctgggtggagccgtttcgtgctccgcaaatgatcacgctggaggggttggcg
acagcgctggaagccggcgccgaggcgcagacggtgttgctgccgatcgaggccggcctg
gccgattttgcgcggatcgtgctcgatgcggctctcgcggcgcgtttccgcatggggcag
cgcttgcgcgatgccgcattcccgactggccaggtggccgtgttcgggcccgacggaagc
ccctcggggctgggcttggtggatgcggatggacgcttgtcgccacagcgattgttcaat
ggactgaatgagatttcagtatgttaa
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integrated database retrieval system
