Xanthomonas oryzae pv. oryzae MAFF 311018: XOO3140
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Entry
XOO3140 CDS
T00360
Symbol
XOO3140
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03030
DNA replication
xom03430
Mismatch repair
xom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XOO3140 (XOO3140)
03430 Mismatch repair
XOO3140 (XOO3140)
03440 Homologous recombination
XOO3140 (XOO3140)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xom03032
]
XOO3140 (XOO3140)
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO3140 (XOO3140)
Enzymes [BR:
xom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XOO3140 (XOO3140)
DNA replication proteins [BR:
xom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XOO3140 (XOO3140)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XOO3140 (XOO3140)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
BAE69895
LinkDB
All DBs
Position
complement(3561061..3562089)
Genome browser
AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSNQPLQPVYLIAGPETLRVLEAADAVRARARAEGIGEREVFDADGRDFD
WNQLDASFNAPSLFSPRRLVEVRLPSGKPGKDGAEVITRFCANPPPDVVLLITANDWSKA
HQGKWAEAVGRIGTIAVAWAIKPHELSDWIERRLRAHGLRADAAAVQRLSERVEGNLLAA
AQEIDKLALLADGKTLDLQAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRAEGE
AVAALMPILIKELLRTASLAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPRRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgccccgagcaactggccggccagtccaaccagccgttgcagccagtctat
ctgatcgccggcccggagaccttgcgtgtgcttgaggccgccgacgctgtgcgcgcgcgc
gcgcgcgctgaaggcatcggtgaacgcgaagtcttcgatgccgatggccgcgatttcgac
tggaatcagctcgacgccagcttcaacgcgcccagcctgttcagtccgcgccgcctggtc
gaggtgcgcctgcccagcggcaagcccggcaaggatggcgccgaggtcatcacccgcttc
tgcgccaacccgccgccggacgtggtgctgctgatcaccgccaacgactggagcaaggcg
catcagggcaagtgggccgaggccgtcggccgcatcggcacgattgccgttgcctgggcg
atcaagccgcatgaactctccgactggatcgagcgtcgcctgcgtgcgcacggcctgcgt
gccgacgccgccgcggtgcagcgcctgagcgagcgggtggaaggcaacctgcttgccgct
gcgcaggaaatcgacaagctcgctctgctggccgatggcaagacactggatctgcaggcg
atggagtcgttggtggccgatgccgcacgctacgacgtctttcggctggccgaaaccacg
ttttcggggcagccggccgcggtgatccgcatgcttgccggcctgcgcgccgaaggcgag
gcggtcgccgcgctgatgccgatcctcatcaaggaattacttcgcactgcgtcgctggcg
aaggtgcaggccaacggcggcaacctcgctgccgaaatgaaggcgcaggggctgtgggaa
tcgcgccaggcgccattcaagcgcgcgctgcaacgtcaccccgaaccgcgtcgctgggag
cgcttcgtcgccgaagccgggctggtcgatcgcatggccaaaggtcgcgccgacggcgac
gcctgggtgggtctggaacgcctgctggtggccgtggccgaagcccgcgcggtgagattg
ttggcgtga
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