Xanthomonas oryzae pv. oryzae MAFF 311018: XOO3330
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Entry
XOO3330 CDS
T00360
Symbol
XOO3330
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOO3330 (XOO3330)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO3330 (XOO3330)
Enzymes [BR:
xom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
XOO3330 (XOO3330)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XOO3330 (XOO3330)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BAE70085
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All DBs
Position
complement(3792980..3793654)
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AA seq
224 aa
AA seq
DB search
MPRHARGFDVEAAFAHLARRDRALGAWMKRIGAIAPQPGWRKPFDPVDALARAILFQQLS
GKAASTIVARVKVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLVRRESAGEIPS
LRRLAFMEDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEH
MPTPKELAVRGERWGPYRTYAAFYLWKIADFSVATNVPTPRSQE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccacgcccgcggattcgatgtggaggctgcgttcgcgcatcttgctcggcgt
gaccgcgcgttgggcgcgtggatgaagcgcatcggcgcgatcgccccgcagccggggtgg
cgcaaaccgtttgatccggtggatgcgctggcgcgcgcgattctgtttcagcagctcagc
ggcaaggcggcttcgaccatcgtggcgcgggtgaaagtggcgatcggcgcgcagcggctg
catgccgatacgctcggtcgcatcgacgatgcagcactgcgtgcctgcggcgtttccggt
aacaaggcgctggccctgcgcgatctggtgcggcgcgaaagcgcaggtgagataccgtcg
ctacgcaggctcgctttcatggaggacaacgccatcgtcgacgcgctggtgccggtgcgc
ggcatcggccgctggacggtggagatgatgctgatgttccgcctgggccgcccggatctg
ctgcccatcgacgacctgggcgtgcgcaaaggtgcgcagcgcgtggacaagcaggagcat
atgcccacccccaaggagctggccgttcgtggcgaacgctggggcccataccgcacctac
gccgcgttctatctgtggaaaatcgccgacttcagcgtggcgacgaacgtgccgacaccg
cgttcgcaggagtag
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