Xanthomonas oryzae pv. oryzae MAFF 311018: XOO3363
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Entry
XOO3363 CDS
T00360
Symbol
XOO3363
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XOO3363 (XOO3363)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xom03021
]
XOO3363 (XOO3363)
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO3363 (XOO3363)
Enzymes [BR:
xom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XOO3363 (XOO3363)
Transcription machinery [BR:
xom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XOO3363 (XOO3363)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XOO3363 (XOO3363)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BAE70118
UniProt:
Q2P009
LinkDB
All DBs
Position
complement(3828479..3829477)
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATLSLSKQGPGTVTAADIRTDHN
VEIINGDHVICHLTKDTALNMRLKIERGFGYQPAAARRRPDEETRTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtggtccgcagatcgaacgtcttacc
gacaaccgtgccaaggtcgtgatcgaacccttggagcgcggttacgggcacacgctgggc
aatgccctgcgtcgtgtgttgttgtcgtcgatccccggttttgcgatcaccgaggtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaagggttgcaggaagacgtgcttgac
gtcctgctgaacctgaaagacgtggcgattcgcatgcacagtggcgacagcgccacgctg
tcgttgtccaagcagggtccgggtacggtcactgcggccgacatcaggaccgatcacaac
gttgagatcatcaacggcgaccacgtgatctgccacctgaccaaagacaccgcattgaac
atgcgcttgaagatcgagcgcggcttcggctatcagccggctgctgcgcgtcgtcgtccg
gacgaagagacccgcaccatcggccgtctgatgctggatgcgtcgttctcgcccgtgcgt
cgcgttgcctacgctgtggaagctgcgcgtgttgaacagcgcacggacctcgacaagctg
gtgatcgatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgatcagctgtcggtgttcggcgatttcacccaccgcgatcgcggtgcg
gccaagccggctgccagcggcgtggatccggtgctgctgcgcccgatcgacgacctggag
ctgaccgtgcgttcggccaattgcctcaaggctgagagcatctactacatcggcgatctg
atccagaagaccgaagtcgagctgctcaagaccccgaatctgggtaagaagtcgctgacc
gaaatcaaggaagtgctggcacagcgcggccttgcattgggcatgaagctggagaactgg
ccgccggccggcgtcgcccagcacggcatgcttggttaa
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