Xanthomonas oryzae pv. oryzae MAFF 311018: XOO4043
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Entry
XOO4043 CDS
T00360
Symbol
XOO4043
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XOO4043 (XOO4043)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xom03019
]
XOO4043 (XOO4043)
03110 Chaperones and folding catalysts [BR:
xom03110
]
XOO4043 (XOO4043)
03029 Mitochondrial biogenesis [BR:
xom03029
]
XOO4043 (XOO4043)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xom04147
]
XOO4043 (XOO4043)
Enzymes [BR:
xom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XOO4043 (XOO4043)
Messenger RNA biogenesis [BR:
xom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XOO4043 (XOO4043)
Chaperones and folding catalysts [BR:
xom03110
]
Heat shock proteins
HSP60 / Chaperonin
XOO4043 (XOO4043)
Mitochondrial biogenesis [BR:
xom03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XOO4043 (XOO4043)
Exosome [BR:
xom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XOO4043 (XOO4043)
Exosomal proteins of other body fluids (saliva and urine)
XOO4043 (XOO4043)
Exosomal proteins of breast cancer cells
XOO4043 (XOO4043)
Exosomal proteins of colorectal cancer cells
XOO4043 (XOO4043)
Exosomal proteins of bladder cancer cells
XOO4043 (XOO4043)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAE70798
UniProt:
Q2NY29
LinkDB
All DBs
Position
complement(4561561..4563201)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DQAVKAAVVELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMKKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLALEKATIKDLGRAKKVQVSKENTTIIDGAGDSAAIESRVGQIKTQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALVAVGNLTGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGTGNYGYNA
ANGEFGDMVEFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPAMPAGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacattcgtttcggtgaagacgcacgtacccgcatggttcgtggcgtc
aacgtgcttgccaatgccgtgaaggccaccctgggcccgaagggccgcaacgtcgtgctc
gaaaagagcttcggcgccccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
accaacgataacgctggcgacggcaccaccaccgccaccgtgctggcgcaggccctgatc
cgcgaaggcgccaaggctgtggccgccggcatgaacccgatggatctgaagcgcggtatc
gaccaagccgtcaaggctgcggtcgtcgagctgaagaacatctccaagcccaccaccgac
gacaaggcgattgcccaggtcggcaccatctcggccaactcggacgagtcgatcggcaac
atcattgctgaagcgatgaagaaggtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgagctggacgtggtcgagggcatgcagttcgatcgcggctacctc
tccccgtacttcatcaacaaccagcagagccagtcggccgacctggacgacccgttcatc
ctgctgcacgacaagaagatctccaacgtgcgtgacctgctgcccgtgctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtggcggaagaagtcgaaggcgaagcgttggcg
accctggtggtcaacaccattcgtggcatcgtcaaggtcgtggccgtcaaggcaccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtgggcctggcgctggaaaaggcgaccatcaaggacctgggccgcgcc
aagaaggtgcaggtttccaaagaaaacaccacgatcatcgacggcgctggcgattcggcc
gcgatcgagtcgcgcgtcggccagatcaagacccagatcgaagacacctcgtccgattac
gaccgtgaaaagctgcaggaacgcgtggccaagctggccggcggcgttgcagtgatcaag
gttggcgcctcgaccgaaatcgaaatgaaggaaaagaaggcacgcgtcgaagacgccctg
cacgccacccgtgcagccgtcgaagaaggcgtggtcccgggcggcggcgtggccctggtg
cgtgcgctggtggccgtcggtaacctgaccggtgccaacgaagaccagacccacggcatc
cagatcgctttgcgcgccatggaagccccgctgcgcgaaatcgtcgccaatgccggcgaa
gagccgtccgtgatcctgaacaaggtcaaggaaggcaccggcaactacggctacaacgcg
gccaacggcgagttcggcgacatggtcgaattcggcatcctggacccgaccaaggtcacc
cgttcggcgctgcagaacgccgcctcgatcgccggcctgatgatcaccaccgaagccatg
gtggccgatgcaccgaagaaggacgagccggcaatgccggccggcggtggcatgggcggc
atgggcggcatggatttctga
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integrated database retrieval system
