Xanthomonas oryzae pv. oryzae KACC 10331: XOO0003
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Entry
XOO0003 CDS
T00235
Symbol
recF
Name
(GenBank) DNA replication and repair RecF protein
KO
K03629
DNA replication and repair protein RecF
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XOO0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO0003 (recF)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
XOO0003 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
AAA_27
ABC_tran
AAA_25
Aq_aa27
AAA_18
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AAW73257
UniProt:
Q5H713
LinkDB
All DBs
Position
4003..5109
Genome browser
AA seq
368 aa
AA seq
DB search
MHVMRLSIHRLRRFQTVELHPASALNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDGL
IQQGANDLEVFVEWKEGGSAAGERTRRAGLRHSGQEWTGRLDGEDVAQLGSLCAALAVVT
FEPGSHVLISGGGEPRRRFLDWGLFHVEPDFLALWRRYVRALKQRNALLKQGAQPRMLDA
WDHELAESGETLTSRRMRYLERLQDRLIPVADVIAPSLGLSALTFAPGWKRHEVSLADAL
LLARDRDRQNGYTSQGPHRADWMPHFDVLPGKDALSRGQAKLTALACLLAQAEDFAFERS
EWPVIALDDLGSELDRHHQARVLHRLVSAPAQMLITATEIPPGLADAGALLHRFHVEHGQ
VALQAPSD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaatgcggttgtccattcatcggcttcgtcggttccagaccgtcgagctacat
ccggccagtgcattgaatctgctcaccggcgacaacggtgcaggcaagaccagcgtgctc
gaggcgctgcacctgatggcatatggccgcagcttccgtggccgcgtccgtgacggcctg
atccaacaaggcgcgaacgaccttgaagtcttcgtggaatggaaagaaggcggcagtgct
gcaggcgagcggacacgtcgcgccggcctacgtcatagcggccaggaatggacggggcgt
ctggatggcgaagacgttgcacagttggggtctttgtgtgctgcgttggccgtggtgacc
tttgagcccggcagccacgtgttgatcagcggcggtggtgaaccccgccgtcgcttcctg
gactgggggctgttccacgtggaacccgacttcctcgccttgtggcgtcgctacgtgcgc
gcgctcaaacagcgcaatgcgttgctcaaacaaggcgcgcagccgcgcatgctggatgcc
tgggatcatgaactcgccgaatccggggaaacgctgacatcccggcgcatgcgctacctg
gaacgcctgcaggaccggctgattccggtggcagacgtgatcgcaccgtcgcttgggctg
tccgcgttgacgttcgccccaggctggaaacgccacgaggtctcgcttgccgatgccctt
ttgttagcccgcgatcgcgaccgccagaacggttacacctcgcaaggcccacaccgcgcg
gattggatgcctcacttcgacgtgctccctggcaaagatgcactttctcgcgggcaagcc
aagctcactgccctcgcctgcctccttgcacaagcagaagactttgcgttcgagcgaagc
gaatggccggtgatcgcgctggacgacctgggttcggagctggaccggcaccaccaggcg
cgcgtcctgcaccggctggtctcggcgccagcgcagatgctgatcaccgcgaccgagatc
ccgcccgggctcgcggacgccggtgcgctattgcaccggttccacgtggaacacggtcag
gtcgcactgcaagccccctcggactga
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