Xanthomonas oryzae pv. oryzae KACC 10331: XOO0310
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Entry
XOO0310 CDS
T00235
Symbol
yrbF
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02065
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XOO0310 (yrbF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xoo02000
]
XOO0310 (yrbF)
Transporters [BR:
xoo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
XOO0310 (yrbF)
Phospholipid transporter
XOO0310 (yrbF)
Mce system transporter
XOO0310 (yrbF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_29
SMC_N
AAA_16
AAA_22
RsgA_GTPase
nSTAND1
AAA_23
AAA_33
AAA_30
AAA_25
DUF87
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AAW73564
UniProt:
Q5H656
LinkDB
All DBs
Position
complement(321134..322093)
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AA seq
319 aa
AA seq
DB search
MRVAWLRCRTRCYADSDTQPAHRHWVNATILHAPVWLCSAVRGLLYRVGILLKAPMTAFA
SPVVQLSGVRIDRDGRTILRDVSLDVPRGSITAVLGPSGSGKSTMLATLTGELRPVAGTV
TLFGNAIPTGSRALLEMRRNVGVLLQGNGLLTDLSVAENVALPLRTHTRLPAAVLQRLVQ
MKLHAVGLLAAADAWPRELSGGMARRVALARALALDPPLMIYDEPLTGLDPIASGVIMSL
IQRLNDSLGLTSIIVTHHVHETLPICDQAVVIANGGIVFAGTPEQLQDSADPLVQQFLHG
QPDGPIAFDAAPRRDRSAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtggcctggttacgctgcaggacacgctgttacgcagacagcgacacgcaaccc
gcacatcgccactgggtgaatgcgacaatactgcacgcgccagtctggttatgttcagcg
gtgcgcgggctactctatcgcgttggaattttgttaaaggcaccaatgacggctttcgct
tcccctgtcgtgcagttgtccggtgtccgtatcgatcgcgacgggcgcacgatcctgcgc
gatgtctcgctggatgtgccacgcggcagcatcacggccgtgctcggtccgtccggtagt
ggcaaatccaccatgctggcgacgctgaccggcgagctgcgcccggtcgcaggcacggtc
acgttgttcggcaatgcgattcccaccggtagccgcgcgctgctggagatgcgtcgcaac
gtcggcgtgctgctgcagggcaatggcctgctcaccgacctcagcgtggccgagaacgtc
gcgctgccattgcgcacccacacgcgcttgccggcagcggtgctgcagcgtctggtccag
atgaagttacatgcagtcggcctgctggccgcagccgatgcatggccgcgcgagttgtcc
ggcggcatggcgcggcgcgtggcactggcgcgcgcgctggcactggacccgccgctgatg
atctacgacgagccgctgaccggactggacccgatcgcttcgggcgtgatcatgagcctg
atccaacgcctcaacgatagtctaggcctgaccagcatcatcgtcactcaccatgtgcac
gagacgctgccgatctgcgatcaggcggtggtgatcgccaatggcggcatcgtgttcgcc
gggacgcccgaacaattgcaagacagcgccgacccgctggtgcagcagttcctgcacggc
cagccggacggcccgatcgccttcgatgccgcgccgcgccgcgaccggagtgctgcctga
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