Xanthomonas oryzae pv. oryzae KACC 10331: XOO0488
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Entry
XOO0488 CDS
T00235
Symbol
pcaR
Name
(GenBank) transcriptional regulator
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xoo03000
]
XOO0488 (pcaR)
Transcription factors [BR:
xoo03000
]
Prokaryotic type
Helix-turn-helix
IclR family
XOO0488 (pcaR)
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Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
HTH_11
TrmB
HTH_36
HTH_46
Motif
Other DBs
NCBI-ProteinID:
AAW73742
UniProt:
Q5H5M8
LinkDB
All DBs
Position
complement(506040..506711)
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AA seq
223 aa
AA seq
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MSRISLETGISRAAVRRVLHTLAKLGYVGEQGRDYVLLPRVLGIGGAYAASSSMTAAAQP
VLDGLRDQLHESCSLGVLDGDDLLYVARSETVRIMSIGLRPGTRLPAYCTSMGRVLLAAL
PADTLQAYLERTTLRPPTDRTVTQAAALLEVLARTRRGGMCLTDQELEIGLRSIAVPVRN
LRGEVIAALNVGAQAGRVSLQTMQTQLLEPLKQAAQRLGTLLS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggatcagcctggaaaccggcatctcgcgcgcggccgtgcggcgagtactgcat
acgctggccaagctgggctatgtgggcgagcaagggcgtgactacgtgttgttgccgcgc
gtcctggggattggcggtgcgtatgcggcgtcttcgtcgatgaccgcagcagcacagccg
gtgctggacgggctgcgcgaccagttgcacgaatcctgctcactcggcgtgctggatggc
gacgatctgctgtacgtggcgcgttcggagacggtgcgcatcatgtcgatcgggctgcgc
ccgggcacgcggctgccggcctattgcacctcgatgggccgggtgttgctggccgccctg
cccgcggacaccttgcaggcctatctggaacgcaccaccttgcgtccgcctaccgaccgc
acggtaacccaggccgcggcgttgctggaggtgctggcgcgcacgcgccgcggaggcatg
tgcctgaccgatcaggagttggagatcggcctgcgctcgattgcggtgccggtgcgcaac
ctgcgtggcgaggtgatcgccgcgctcaacgtcggcgctcaggccgggcgggtgagcttg
cagaccatgcaaacgcagttgctggaaccgctgaagcaggcggcacagcggctgggaacc
ttgctgagttag
DBGET
integrated database retrieval system
