Xanthomonas oryzae pv. oryzae KACC 10331: XOO0502
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Entry
XOO0502 CDS
T00235
Symbol
wbnF
Name
(GenBank) nucleotide sugar epimerase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00053
Ascorbate and aldarate metabolism
xoo00520
Amino sugar and nucleotide sugar metabolism
xoo01100
Metabolic pathways
xoo01240
Biosynthesis of cofactors
xoo01250
Biosynthesis of nucleotide sugars
Module
xoo_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
XOO0502 (wbnF)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
XOO0502 (wbnF)
Enzymes [BR:
xoo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
XOO0502 (wbnF)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AAW73756
UniProt:
Q5H5L4
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Position
complement(520401..521435)
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AA seq
344 aa
AA seq
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MRRFVCSDRWRRPFVCAFPRITAMTILITGAAGFIGAYTCRALAARSEAVVGLDNYNRYY
DPQLKHDRVAALCPGVDIRTLDLTDRDGLAALFDEIQPTRVVHLAAQAGVRYSLENPSAY
VDSNLVGFVNMLELCRHRGVQHLVYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAAN
ELMGYTYAQLYGLRATGLRFFTVYGPWGRPDMAPLIFSRAVLAGRPIEVFNHGKMQRDFT
FVEDIVAGVLGALDTPSSEPVPHRVFNLGNHTPVELEYFIDVIAQAAGRPAEKVYRPMQP
GDMIRTMADTQRAQAAFGFDPATPVERGLPQVVNWCRQYFGKRA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcgcttcgtgtgttcagatcggtggcgccggccttttgtttgcgcatttcccagg
atcacagccatgaccattctcatcaccggcgctgccggcttcattggtgcctacacctgc
cgcgcgctggcggcccgcagcgaggcggtggtggggctggacaactacaaccgctactac
gatccgcagctcaaacacgaccgcgtggcggcgctgtgccccggcgtcgatatccgcacg
ctggatctgaccgatcgcgacggcctggctgcattgttcgatgagatccagcctacgcgc
gtggtgcatctggctgcgcaggcgggcgtgcgatattcgctggaaaacccgtctgcttac
gtcgacagcaacctggttggcttcgtcaacatgctcgagttgtgccgccaccgcggcgtg
caacacctggtgtacgcctccagcagctccgtctatggcgattcggccacgccaccgttt
tccgaagaccagcgtgtggaccagccgcgctcgttgtacgcggcgaccaaggcggccaat
gaactgatggggtacacctacgcgcagctgtacgggctgcgcgcgaccgggctgcgcttc
ttcaccgtgtacgggccgtggggccggccggacatggcgccgctgatcttcagccgtgcg
gtgctggcggggcggccgatcgaggtgttcaaccacggcaaaatgcagcgcgatttcacc
ttcgtcgaggacattgtggccggcgtgctgggcgcgctggacacgcccagcagcgagccg
gtgccgcaccgggtgttcaacctgggcaaccacacgccggtggagctggaatacttcatc
gacgtgatcgcgcaggccgccggtcgcccggccgagaaggtctaccggccgatgcagccg
ggcgacatgatccgcaccatggccgatacccagcgcgcgcaggccgcgttcggattcgat
ccggctacccccgtcgagcgtgggttgccgcaggtggtgaattggtgccggcagtatttc
ggcaagcgcgcctag
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