Xanthomonas oryzae pv. oryzae KACC 10331: XOO0509
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Entry
XOO0509 CDS
T00235
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOO0509 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO0509 (exoA)
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XOO0509 (exoA)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XOO0509 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AAW73763
UniProt:
Q5H5K7
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All DBs
Position
525189..526046
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AA seq
285 aa
AA seq
DB search
MRYAFTNLQSPFPNPGSSSMRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEH
QLAGPDFLPTGYKAWFRDASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG
NRSVVSFYIPSGSSGELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKN
WKSNQKNSGCLPPERDWLNGLCADVPDDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAA
RTNNVGWRIDYQLVTPGLRDTLRACSIYREERFSDHAPYIVDYAQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcggtacgctttcacgaatctccaatccccattcccgaatcccggctcttcatctatg
cgcatcatcagttttaacgccaacggcctgcgctcggccgccagcaagggtttcttcgct
tggttcgccgcgcaggacgccgatgtgctgtgcgtgcaggagaccaaggcccaggagcac
caactggccgggccggacttcctgcccaccggctacaaggcttggttccgcgatgccagc
actaaaaagggctacagcggcgtggcaatctacagccggcacgagcccgacgaggtgcgt
accgcgctgggctggccggaattcgacgaagaaggacgctatatcgaagcgcgcttcggc
aaccgcagcgtggtgtccttctacatcccctccggttcctcgggcgagttgcgccagggc
tacaagttccaggtgatgcaatggctgcggccgatcctggacgaatggctggccagcggc
cgccagtacgtgctgtgtggcgactggaacatcgtgcgcacggcgctggacatcaagaac
tggaaatccaaccagaagaactccggctgcctgccacccgagcgcgactggctcaacggt
ctgtgcgccgacgtgccagatgacgccaacgccgccgaaggccgcggctgggtcgacagc
taccgcgtgctgcatccacaaggccaggactacacctggtggagcaaccgcggcgccgcg
cgcaccaacaatgtcggttggcgtatcgactaccaactggtcacccccggcctgcgcgac
accttgagggcttgctcgatctaccgcgaagagcgcttctccgaccacgcaccgtacata
gtggattacgcgcagtga
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