KEGG   Xanthomonas oryzae pv. oryzae KACC 10331: XOO0603
Entry
XOO0603           CDS       T00235                                 
Symbol
traF
Name
(GenBank) TraF protein
  KO
K03200  type IV secretion system protein VirB5
Organism
xoo  Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xoo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XOO0603 (traF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xoo02044]
    XOO0603 (traF)
Secretion system [BR:xoo02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   XOO0603 (traF)
SSDB
Motif
Pfam: T4SS CENP-Q DUF8152 HEF_HK DivIC
Other DBs
NCBI-ProteinID: AAW73857
UniProt: Q5H5B3
LinkDB
Position
630006..630719
AA seq 237 aa
MNRFLAVITVACSVFLSNSTYAQIPVTDGASIAQQVAAQVETIAKWKMQYDQMTSQINQM
KQQYESLTGSRNLGQILNNAALRDYLPNDWQGVYDAVKSGGYSGLSGRALSIYEGNKAFD
ACAHFKVADQRTACEAQAVKGAQDKAFALDAYDKAKSRLTQIDQLMAKINDTPDPKAIAE
LQGRIAVEQAMIQNEQTKLQMYQMVAAAEDRLQEQRQRELNAKAGARRGWIQPQVTN
NT seq 714 nt   +upstreamnt  +downstreamnt
gtgaacaggttcttagcggtaatcaccgtagcttgctcagttttcctgagcaattccaca
tacgcgcagattccggtcactgacggcgcttccattgcgcagcaggtcgccgcccaggtc
gaaaccatcgccaagtggaagatgcagtacgaccagatgaccagccaaatcaaccagatg
aagcagcaatacgagtcgctgaccggctcgcggaacctcgggcaaatcctgaataacgcg
gccctgcgcgactacctgccgaacgactggcaaggcgtctatgacgccgtgaagtcgggc
ggctattccggcctgagcggccgggcgctgtcaatctatgagggcaacaaggctttcgat
gcctgcgcgcatttcaaggtcgcagaccagcggacggcgtgcgaagcccaggccgtcaag
ggtgcccaggacaaggcttttgccctggatgcctacgacaaggcgaagtcgcggctaacc
caaatcgaccagctcatggcgaagatcaacgacacgcccgatccgaaggccatcgccgag
ctgcaaggccggatcgccgtcgaacaggcgatgatccagaacgagcaaacgaagctccag
atgtatcagatggtcgcggcggccgaagatcgtttgcaggagcagcggcaacgcgaactg
aacgccaaggcaggcgcacggcgcggctggattcagccccaggtcacgaattga

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