Xanthomonas oryzae pv. oryzae KACC 10331: XOO0607
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Entry
XOO0607 CDS
T00235
Symbol
Dcm
Name
(GenBank) Site-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00270
Cysteine and methionine metabolism
xoo01100
Metabolic pathways
Module
xoo_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
XOO0607 (Dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xoo03000
]
XOO0607 (Dcm)
03032 DNA replication proteins [BR:
xoo03032
]
XOO0607 (Dcm)
03036 Chromosome and associated proteins [BR:
xoo03036
]
XOO0607 (Dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
xoo02048
]
XOO0607 (Dcm)
Enzymes [BR:
xoo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
XOO0607 (Dcm)
Transcription factors [BR:
xoo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
XOO0607 (Dcm)
DNA replication proteins [BR:
xoo03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
XOO0607 (Dcm)
Chromosome and associated proteins [BR:
xoo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
XOO0607 (Dcm)
Prokaryotic defense system [BR:
xoo02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
XOO0607 (Dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
TRM5-TYW2_MTfase
BEN
Motif
Other DBs
NCBI-ProteinID:
AAW73861
UniProt:
P52311
LinkDB
All DBs
Position
634770..636098
Genome browser
AA seq
442 aa
AA seq
DB search
MYDPSLRSALNERQGHSAMTRPIGIDLFAGAGGLSLGFEQAGFDLVAAVDIDPIHCAAHK
FNFPKCATVCKSVVDVTGDELRRIAGIGKRDIDIVIGGAPCQGFSLIGKRALDDSRNQLV
HHYVRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVVTDYRVLNAADYGV
PQDRRRLILMGARKGLPLPAYPEPTGRTTVGDAIGDIPDAESFPELWERDWVKAKYGKPS
TYAAYLRGKKDDPTDFGYRRQFDPMLLTGSLLTDHTELSRQRFAAIAPDDVEPVSRFKKL
ALNGICNTLRAGTASDRGAFTSPRPIHPTVPRVITVREAARLHSYPDWFRFHATKWHGFR
QIGNSVPPLLARAVGGQIMKALRKKPEKPSEMLALGDQSLIGISMTDAAAMFGVSSTVIA
RRSRPVDRPAPRRHEERELVTA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgatcccagtctgcgatctgcactcaacgaacgacaaggacattcagctatgaca
cgccccatcgggatcgacctgttcgctggggccggggggctcagcctcggtttcgagcaa
gctggattcgacctcgtcgcagcggtggatatcgacccaatccactgcgctgcgcacaag
ttcaacttccccaagtgcgccactgtctgcaagagcgttgtcgatgtaacgggcgacgaa
ctgcgtcgcatcgccggcatcggaaagcgcgatatcgacatcgtgattggtggtgcgccc
tgtcaaggcttctctctcatcgggaagcgcgcgctcgacgactcgcgcaatcagctcgtg
catcactatgtgcgcgtggtgatggaattgaagcccaaatactttgtgttcgagaacgtc
aagggcctcaccgtcggtaagcatcgccagtttctaaaggaggttatcgaggcctttcag
aatggtggctacgatgtagtaacggattacagagtgctcaacgcagccgactatggagtg
ccgcaagatagacgccgtttgatcctcatgggcgctcgcaaaggtcttcctcttccggcc
tacccggagcctactggacgcacgaccgtaggcgatgctataggcgacatacccgatgcg
gagagcttccctgagctatgggagcgcgactgggtgaaggcgaaatacggtaagccatca
acgtatgcggcttatcttcgtggcaagaaagacgatccgaccgacttcggctatcgccga
caattcgaccccatgctactcactggctcattgttgacagaccacaccgagttatcgcgt
caacgctttgctgccatagctcccgacgatgtggagcctgtcagtcggttcaagaaactg
gctctaaacggcatctgcaacacactacgcgcaggtactgcgagcgatcgaggtgcattc
acgtcgcctcgcccaattcatccgacggttccgcgcgtcatcactgttcgtgaagctgct
cgcctgcactcctatccggattggttccgattccatgcgaccaagtggcacgggttccgc
cagatcggcaacagcgtccctccgctgctagctcgtgccgtcggaggacagatcatgaaa
gctctgcgcaaaaagccagaaaagccgtccgagatgttggcgcttggagaccagagcctg
attggcatttctatgaccgatgccgcagcgatgtttggcgtttctagcacggtcattgca
cgacgtagccgccctgttgatcggcccgcacctcgacgtcacgaagaaagagagctggta
acagcatga
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