Xanthomonas oryzae pv. oryzae KACC 10331: XOO0778
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Entry
XOO0778 CDS
T00235
Symbol
metB
Name
(GenBank) cystathionine gamma-lyase-like protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00260
Glycine, serine and threonine metabolism
xoo00270
Cysteine and methionine metabolism
xoo00450
Selenocompound metabolism
xoo00670
One carbon pool by folate
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01230
Biosynthesis of amino acids
Module
xoo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XOO0778 (metB)
00270 Cysteine and methionine metabolism
XOO0778 (metB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
XOO0778 (metB)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XOO0778 (metB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xoo04147
]
XOO0778 (metB)
Enzymes [BR:
xoo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
XOO0778 (metB)
Exosome [BR:
xoo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
XOO0778 (metB)
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AAW74032
UniProt:
Q5H4T8
Structure
PDB
PDBj
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All DBs
Position
792353..793546
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AA seq
397 aa
AA seq
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MSNRTTHSHDGDRALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSR
THNPTRFAYERCVAALEGGTRAFAFASGMAATSTVMELLDAGSHVVAMDDLYGGTFRLFE
RVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGL
LTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHV
LAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPV
ARREQLGISDALVRLSVGIEDLGDLRGDLERALVNQN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgcaccactcatagccatgacggcgatcgcgcgctgtcgcttgcaacgctg
gcgatccatggagggcagtcgccggatcccagcaccggcgcagtgatgccgccgatctac
gccacgtccacgtatgcgcaatccagccccggcgaacaccagggatttgagtattcgcgc
acacataacccgacgcggttcgcctacgagcgctgcgtggccgcactggaaggcggcacg
cgcgcgttcgcgttcgcctccggcatggctgccacttccaccgtgatggagttgctggat
gccggcagccacgtggtggcgatggacgatctgtacggcggcaccttccgcctgttcgag
cgcgtgcgccgtcgcaccgccggcctggatttcagtttcgtcgacctgaccgacccggcc
gcgtttaaggcggcgatccgcgcagacaccaagatggtgtggatcgaaacgccgaccaac
ccgatgctcaagctggtcgacatcgccgccattgcggtgatcgcgcgcaagcatggcctg
ttgaccgtggtcgacaacacctttgcctcgccgatgctgcagcgcccgctcagcctgggc
gccgacctcgtcgtgcactcggccaccaagtacctcaacggccactcggacatggtgggc
ggcattgcggtggtgggcgacaacgccgagctcgccgagcagatggcgttcctgcagaac
tccatcggtggcgtgcaaggcccgttcgacagcttcctcgcgctacgcggattgaagacc
ttgccgctgcgcatgcgcgcgcactgcgaaaatgccctggcgctggcgcaatggctggaa
acgcaccccgccatcgaaaaggtgatctaccccggcctggcctcgcacccgcagcatgtg
ctcgcgaaacgccagatgtccggcttcggcggcatcgtctccatcgtcctcaagggcggc
ttcgacgcagccaagcgtttctgcgagaagaccgagctgttcaccctggccgaatcgctc
ggtggtgttgaaagcctggtgaaccatcccgccgtcatgacgcacgcctccatccccgtt
gcccgccgcgagcagctcggcatcagcgatgcgctggtgcggttgagcgtgggaatcgag
gatcttggggatttgcgtggggatttggagcgggcgttggtgaatcaaaattga
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