Xanthomonas oryzae pv. oryzae KACC 10331: XOO0821
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Entry
XOO0821 CDS
T00235
Symbol
pel
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00040
Pentose and glucuronate interconversions
xoo01100
Metabolic pathways
xoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XOO0821 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XOO0821 (pel)
Enzymes [BR:
xoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XOO0821 (pel)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Lectin_like
TSGP1
Motif
Other DBs
NCBI-ProteinID:
AAW74075
UniProt:
Q5H4P5
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All DBs
Position
complement(838993..840033)
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AA seq
346 aa
AA seq
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MQLLGWATQNGRTKGGSKAAAANIYTVKTAAELKAALSASVGSNGRIIKVSGIIDISEGK
PYTRTSDMKKRARLDVPTKTTLIGITSNAEIREGYFYVKANDVIIRNIAIENPWDPEPVW
DLNDGRACNWNSEYDGLTVEGASNVWVDDVTFTDGRRTDDQNGTENGRPKHHQDGAMDIK
KGANFVTVSYSVLKSHEKNNLIGSSESASSTDSGKLKVTIHNTLFENVSARAPRVRFGKV
HLYNNYHVCGTSNSVYRFSYAHGVGKESKIFSERNVFEISGVSSCNKIAAGYGGSVYRDQ
GSLLNGKALSCAWNSNIGWTPPYTYNLLSVDKVATDVKVKAGAGKL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgcaactacttggttgggcgacgcagaacggcagaaccaagggcggctccaaagccgca
gccgccaacatctacaccgtcaagactgccgccgagttgaaagctgcattgagcgccagc
gtggggagcaatgggcgcatcatcaaggtcagcggcatcatcgatatcagcgaaggcaag
ccttacaccaggacctcggacatgaagaagcgtgcgcgtctggacgtgccgaccaagacc
acgctgatcggcatcaccagcaacgcagaaatccgcgaaggctatttttacgtcaaggcc
aacgacgtcatcatccgcaacatcgccatcgagaatccgtgggatccggaaccggtctgg
gacctgaatgatggccgtgcctgcaactggaattcagagtacgacggcctgaccgtggag
ggcgccagtaatgtgtgggtggacgatgtcaccttcaccgatggtcgtcgtaccgacgat
cagaacggcaccgaaaatggccgccccaagcaccaccaagatggggcgatggacatcaag
aagggcgccaatttcgtcactgtctcgtattcggtcctcaagtcgcacgagaagaacaac
ctgatcggctccagcgaaagtgcatccagcaccgacagcggcaagctcaaggtcaccatc
cacaacaccttgttcgaaaacgtttccgcgcgtgctccacgtgtgcgtttcggtaaggtg
catctgtacaacaattaccacgtctgtggtaccagcaatagcgtgtatcggttctcctac
gcgcatggggtcggcaaggaatcgaagatcttctccgagcgtaatgtgttcgagatcagc
ggtgtgagcagctgcaacaagatcgccgccggctacggtggcagcgtgtatcgcgatcag
ggctcgctgctcaatggcaaggcgctgtcgtgcgcgtggaatagcaacattgggtggacg
ccgccttatacctacaacttgctctctgttgataaggtcgctaccgacgtcaaggtgaaa
gcaggcgcaggcaagctgtaa
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