Xanthomonas oryzae pv. oryzae KACC 10331: XOO0839
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Entry
XOO0839 CDS
T00235
Symbol
xerD
Name
(GenBank) integrase-recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xoo03036
]
XOO0839 (xerD)
Chromosome and associated proteins [BR:
xoo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
XOO0839 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AAW74093
UniProt:
Q5H4M7
LinkDB
All DBs
Position
854568..855578
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AA seq
336 aa
AA seq
DB search
MSRNARATFYAVAMSASSPAERRQLAQQLPPLQAADAGVIERFLDRFWAEQGVARQTLES
YRRDLEGLARWRAGAGGGLLGIDRVALFDYLRWRAQANYSPRSTARLLSTLRAFYGWCLR
DGVRSDDPTALIDPPQLPRSLPKALTESQIEALLAAPEVDTPAGLRDRAMLELMYAAGLR
VSELVNLPAVGVNLRQGVLRVTGKGSKDRLVPLGEESQHWLERYLREARPLLAANKPVAA
VDGQVPLFIDAARQALSRQHFWALVKRYAAVAGIDPAMVSPHGLRHSFATHLLNHGADLR
ALQMLLGHSSLSTTQIYTLVARQHLQKLHASHHPRG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcgcaacgcgcgcgccacgttctatgctgttgcgatgtctgccagcagtcctgcc
gaacgccgccaactcgcccagcagctaccgccgctgcaggcggccgatgccggtgtgatc
gagcgtttcctcgaccggttttgggccgagcaaggcgtggcgcggcagacgctggagagc
taccggcgcgatctggaagggttggcgcgctggcgcgccggcgccggcggcggtttgctc
ggcatcgaccgcgtggcattgttcgactatctgcggtggcgtgcccaggccaattactcc
ccgcgcagcacggcgcggctgctgtcgaccttgcgtgcgttctacggctggtgcctgcgc
gatggcgtgcgcagcgacgacccgacagcgctgatcgacccgccacagctgccgcgctcg
ctgcccaaagcgttgactgaaagtcagatcgaggcgctgctggccgcccccgaggtggat
actcctgcgggcctgcgcgaccgcgccatgctggagctgatgtacgccgcgggcctgcgt
gtgagcgagctggtcaacctgccggcagtcggggtgaatctgcgccagggcgtgttgcgg
gtcaccggcaagggcagcaaggaccggctggtgccgctgggcgaggaatcccagcattgg
ttggaacgttacctgcgcgaggcgcgcccgctgctggccgcgaacaagccggtggcggcg
gtggatggccaggtgccgttattcatcgacgccgcccgccaagcgctcagtcgtcagcac
ttctgggcgttggtcaaacgctacgcagcggtggccggcatcgacccggcgatggtcagc
ccacatgggctgcgccacagctttgccacccatttgctcaaccacggcgccgacctgcgc
gcgctgcagatgctgttgggccacagctcgttgtcgaccacccagatctatacgctggtg
gcgcgccagcatctgcagaagctgcacgccagccatcatccgcgtggttag
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