Xanthomonas oryzae pv. oryzae KACC 10331: XOO0842
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Entry
XOO0842 CDS
T00235
Symbol
xadA
Name
(GenBank) outer membrane protein
KO
K21449
trimeric autotransporter adhesin
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xoo02000
]
XOO0842 (xadA)
Transporters [BR:
xoo02000
]
Other transporters
Pores ion channels [TC:
1
]
XOO0842 (xadA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
ESPR
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
AAW74096
UniProt:
Q5H4M4
LinkDB
All DBs
Position
862259..866056
Genome browser
AA seq
1265 aa
AA seq
DB search
MNQIYRKVWNKSLGVWAVASELSSGDSPGAVASASFIDRRHRLALTAAIALALGGAGFAT
PLPANAQSVEVGRGASAPASKATAIGANSHASATGAVATGADSSASGVNSSAIGRPTNAI
GENALAIGHNSFVRQSGENGVAPGANAGVSGANSRTYEDDVVSIGSGNGRGGPATRRITD
VTAGVNATDAVNVAQLRHVADVAENTAQFFKASPGEESVGAYVEGDSALAAGEGANAVGT
ATTALGTGANAVAENATAVGTNALASGQNSAAFGHNAQANGPASVAVGGAAVNEDGEPLI
TNGGVPVTTGATSAGVGGTAVGASAKADGFAASSFGVGAYAAGAQASAFGAVANAAGDYA
TAVGTQTRASGTSSTAVGGPVDLIPGLGLFVQTQASGEASTALGAGAIASGTYATAVGTL
SEASGTEATAVGYFAYAPGEGATAVGPQSLASGELSTALGYFSTARGANSVALGANSVAT
RANTVSVGAAGNERQITNVAAGTQGTDAVNLNQLNAVAETAQTTGKYFKASGSAKKDVGA
YVEGENALAAGEGAKAVGTGTTALGAGAHAVVRKATAVGVGAVADGIGAAALGNTARALG
DNSSAVGSNAVASDIGATANGAGAQALSAYTIALGSKAVASDLHAIAEGFNSTASNVGST
ALGGFSQSNGRLSSALGYSAVASSDYSTAVGLAAQASGASAVAIGEISKATGEESVAVGG
SAFSGWIPTQASGKGAAAFGAGAWATADYTTAIGRDSYADGVNATAVGQSAAALADNTLA
LGGGSRAKAVGASLIGVDASATGINSTGVGRQVNVIGENAVSVGYNSYVRQSAVNGVALG
ANAGATGADSVALGSGSSTYDADTVSVGSGNGRGGPATRRIVNVGAGAVASASTDAINGG
QLFESLSNAASFLGGGAAIGAQGVFVAPTYLIQGASYNNVGAALTALDSKVTELDARSGG
TPANTAARTASLRTATVPAMAATAVSAVSSNVASTAIDATAGVQGTPTAAVVGSITPAAT
STAVGTAAVANNVTGTAIGGSAYAHGANDTAIGSNARVNADGSTAVGANTQIAAVATNAV
AMGDGAQVTAASGTAIGQGARATAQGAVALGQGSVADRANTVSVGSVGGERQVANVAAGT
RATDAVNKGQLDNGVAAANSYTDSRYNAMADSFESYQGDIEDRLRRQNRRLDRQGAMSSA
MLNMSASVAGIASPNRIGAGVGFQNGESALSVGYQRAISPRATVTVGGALSSGDSSIGVG
AGFGW
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagatttatcgcaaggtctggaacaaatcgcttggtgtgtgggccgtcgcctcg
gaactgtctagtggtgacagccccggagccgttgcgtcagcctcgttcatcgatcgccgt
catcgcctggcactgactgccgccatcgctctggcgctgggtggcgccggattcgccacg
ccgcttcccgccaatgcgcaatcggtggaagtgggccgcggcgcatcggcaccggccagc
aaggccaccgccatcggcgccaatagccatgccagcgcaaccggcgcagtggccaccggc
gccgacagcagcgccagtggcgtcaacagcagtgcgattggccgcccgaccaatgcgatc
ggcgaaaacgccctagccatcggccacaacagcttcgtgcgccagagcggcgaaaacggc
gtggcacctggtgccaatgccggcgtgagcggcgcaaactcgcgcacctacgaagacgac
gtggtgtccatcggtagtggcaacggccgcggtggcccggccacgcgccgcatcaccgat
gtcactgccggcgtcaatgccaccgatgcggtcaacgtggcgcagctgcgccacgtggcc
gatgttgctgaaaacaccgcgcagttcttcaaggcgagcccgggcgaagagagcgtaggc
gcctatgtcgaaggcgatagcgcactggctgcaggcgagggcgccaatgccgtcggcacg
gcgaccacagcgttgggaaccggcgccaatgcggtggccgagaacgctactgcggtcggc
accaatgcgctggcgtccgggcagaacagcgcagccttcggccataacgcgcaggccaat
ggcccggccagcgtggccgtgggcggcgctgcagtgaatgaagatggcgagccgttgatc
accaatggcggcgtgccggtcaccaccggcgctaccagcgccggcgtcggcggaaccgca
gttggcgccagcgccaaggccgatggctttgcggcatcgtcgttcggcgtgggtgcgtat
gcggccggtgcgcaggcctctgctttcggtgcggtcgccaatgcggcgggcgattacgcc
actgcggttggcacgcaaacccgcgccagcggcaccagcagcactgccgtcggcggtccg
gtggatctgattcctggtctgggcctcttcgtgcagacccaggccagtggcgaagcctcc
actgcacttggcgccggcgcgattgcgtcgggtacctacgccaccgcggtcggcacgctg
agcgaagcctccggcaccgaagccaccgcggtgggctacttcgcgtatgcgccgggcgaa
ggcgcaaccgccgtgggcccgcaatccttggccagtggtgaactgagcacggcgctgggg
tatttcagcaccgcacgtggcgccaattcggttgcgttgggcgccaactcggtcgccacg
cgcgccaataccgtgtcggtcggcgcagccggtaacgagcgtcagatcaccaatgtagcg
gccggtacgcaaggtaccgacgcggtgaatctgaatcagctcaacgccgttgccgaaacc
gcgcaaaccaccggcaagtacttcaaggccagtggcagcgccaaaaaagatgtcggtgcc
tatgtcgagggcgaaaacgcattggctgcaggcgagggcgccaaggccgtcggtaccggc
accaccgcgttgggtgcgggcgcgcatgccgtggtccgcaaagccacggcagtgggcgtc
ggcgcagtggctgacggcatcggcgcggcagcgctcggtaacaccgcgcgggcactgggc
gacaacagcagcgcggtcggcagcaacgcagtggccagcgatatcggcgccacggcgaat
ggtgcgggcgcgcaggcgctttcggcctacaccatcgcactcggcagcaaagcggtcgcg
tccgaccttcatgccattgctgagggtttcaacagtaccgcctccaatgtcggcagtacc
gccttaggtggcttcagccaatccaacggtcgcttgtcgtcggcgctgggctacagcgcg
gtggcgtcgagcgattacagcaccgccgtcggtttggcggcgcaggcctccggtgccagc
gcggtcgccattggcgaaatcagcaaagccaccggcgaagagagcgtggccgtcggcggc
agcgcgttctccggctggatcccgacacaagcgtccggcaagggcgcagcggccttcggt
gccggtgcttgggccactgcggactacaccaccgccatcggccgggattcctatgccgac
ggcgtcaatgccactgcggtgggccagagcgcagccgcgctagccgacaacacgctggcc
ttgggtggcggtagccgcgccaaggcggtgggcgccagtctgatcggtgtggatgcatcg
gccaccggcatcaacagcaccggcgtcggtcgtcaggtcaacgtcatcggcgaaaatgcg
gtgtcggtgggctacaactcgtacgtgcgccagagcgcagtcaacggcgtggcactgggt
gccaatgccggtgcaaccggtgccgattcggtggcattgggctcgggctcgagcacctac
gatgccgatacggtgtcggtgggcagcggcaacggtcgcggtggcccggccacgcgccgt
atcgtcaatgtgggcgccggcgcggttgccagtgccagcaccgatgcgatcaacggcggc
cagttgttcgagtcgttgagcaatgcagccagcttcctcggcggcggtgcggcgatcggt
gcgcagggtgtgttcgtggcgccgacctatttgatccagggtgcaagctacaacaacgtc
ggtgcggcattgactgcgttggacagcaaggtcaccgaactggacgcacgcagtggtggc
actcccgccaacaccgcagcacgcaccgcgtcgctgcgcaccgcaacagtaccggcaatg
gcggcgactgcggtcagcgctgtgtccagcaacgtcgcaagcactgcgatcgatgcaacg
gccggtgtgcagggcacacccaccgccgccgtggtcggcagcatcacgccggcagccacc
tccacggcggtcggtacggcagcagtggccaacaacgtcaccggcacggcgattggtggc
agcgcgtatgcgcatggcgccaacgacaccgcaatcggcagcaatgcacgcgtcaatgcc
gacggcagcacggcggtaggtgccaatacgcagatcgcggccgtggccaccaatgccgtg
gccatgggcgatggcgcgcaagtgaccgccgcgtccggcaccgcgatcggccagggcgca
cgtgccactgcacaaggtgctgtcgcactgggtcagggctcggttgccgatcgtgccaat
acggtgtcggtgggaagcgtcggcggcgagcgtcaggtagccaatgtggccgccggtacg
cgtgccaccgatgcggtcaacaagggccagttggacaacggcgttgccgccgccaatagc
tacaccgacagccgctacaatgcgatggcagacagcttcgaaagctatcagggcgatatc
gaagatcgtctgcgccgtcagaaccggcgtctggaccgccagggtgcgatgagctcggcg
atgttgaacatgtccgccagcgtggccggtatcgcttcgccgaaccgcatcggtgccggt
gtcggtttccagaacggcgaatccgcattgtcggtgggctaccagcgcgccatcagcccg
cgcgccacggtcaccgtgggcggcgcgctcagtagtggcgacagctcgattggcgtgggt
gccggtttcggctggtaa
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