Xanthomonas oryzae pv. oryzae KACC 10331: XOO0891
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Entry
XOO0891 CDS
T00235
Symbol
prpR
Name
(GenBank) propionate catabolism regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xoo03000
]
XOO0891 (prpR)
Transcription factors [BR:
xoo03000
]
Prokaryotic type
Helix-turn-helix
Other families
XOO0891 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
AAA
HTH_23
HTH_17
nSTAND3
HTH_Tnp_ISL3
HTH_28
AAA_7
HTH_Tnp_1_2
ATPase
Motif
Other DBs
NCBI-ProteinID:
AAW74145
UniProt:
Q5H4H6
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All DBs
Position
complement(915609..917384)
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AA seq
591 aa
AA seq
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MPAEEGDEGVMAVPWVEYRCRRKHRANHTPLILLDLAAPDVASAQRLIHYETSLKRGNSM
RSPATPETAGAALPVIWTVSVSRLTGLLADVIPEFDQRARIEQINLGFAEAVEVIGLRLR
RERCDALVAGGSNAAYLRSRLALPFAHIQATGFDLMEALARARRIAPRIGVVTHASDVPS
FRAFQHSFDLDIEHRRFVTAEDARDCIADLRASGIQVIVGTGMAIDFAEQAGLPGVLLYS
ADSVRQALEQAIALGAAPSTDDLAGRSATRRARRADALLGEDSAMLQVRELVQLYAPHAG
TVLISGETGTGKELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYSDGAFTGARRG
GHTGLIEAAQDGTLFLDEIGELPMALQTRLLRVLEEHEVLRVGATVPVAVDVRVVAASLQ
ELQQLVEQGRFRRDLFYRLAALRIALPPLRSRHDEIALLLAHYFQQLGNIASPLSPAALQ
RLQQHTWPGNVRELRNLVERLCIHWKSQPHDSLSLEQLERWTPELFDTHFGNREAPRELA
DLATSRLQVTATAVRAALDRANGNRALAAQALGVSRTTLWRWMQAQASART
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccgaagagggggacgaaggcgtcatggcggttccttgggtggaatatcgctgt
aggcgcaaacaccgtgccaatcacacgccgttgattcttttagacctcgccgctccagat
gttgcaagtgcgcaacgcttgattcactatgaaacatcactgaaacgtggcaactcgatg
cgcagccctgccactccggaaaccgcaggcgccgccctacccgtcatctggaccgtcagc
gtctcgcgcctgaccggcttactggccgatgtcattcccgagttcgaccagcgcgcgcgt
atcgagcagatcaacctcggctttgccgaagcagtggaggtcatcggcctgcgcctgcgc
cgcgaacgctgcgacgcgctggtggccggcggctccaatgcggcgtacctgcgcagccgg
ctggcgctgcccttcgcacacatccaggccaccgggttcgatctgatggaagcactggcg
cgtgcgcgccgcatcgcgccacgcatcggcgtggtcacccacgccagcgatgtgccgtcg
tttcgcgccttccagcacagcttcgatctggatatcgaacaccgccgcttcgtcaccgcc
gaagacgcacgcgattgcattgccgacctgcgcgccagcggcatccaggtcatcgtcggc
accggcatggcgatcgatttcgccgaacaagctgggctgcccggtgtgctgctgtattcg
gccgattcggtgcgccaggcgctggaacaggccatcgccctgggcgccgccccaagcacc
gatgacctcgccggtcgcagcgccacgcgccgagcacgacgtgccgacgccctgctcggc
gaagacagcgcgatgctgcaggtgcgcgagttggtgcagctatacgcaccgcatgccggc
accgtgttgatcagcggcgagaccggcaccggcaaggaactggttgcacggcaactgcat
gccggcagtcgccgccgtggccgcttcgtggcgatcaactgcggcgccatcagcgaatcg
ctgctggaagcggaactgttcggctacagcgatggcgctttcaccggcgcgcgccgcggc
ggccacaccggcctgatcgaagcagcgcaggacggcacgctgttcctcgacgaaatcggc
gagttgccgatggcgctgcaaacacggctattgcgcgtcttggaagaacacgaagtgctg
cgcgtcggcgcaaccgtgcctgttgcggtggacgtgcgcgtggtggccgccagcttgcaa
gagctgcagcagttggtcgaacaaggccgcttccgccgcgatctgttctatcgcctggcc
gcacttcgcatcgcactgccgccattgcgcagtcgccacgacgagatcgcgctgttgctt
gcgcattatttccagcaactcgggaacatcgcatcgccgttgtcgcccgccgcattgcaa
cgcctgcaacagcacacctggcccggcaacgtgcgcgaactgcgcaatctggtcgaacgt
ctatgcattcactggaaatcccaaccgcacgacagcctcagcctggagcaactcgaacgc
tggacgccggagttattcgacacgcatttcggcaaccgcgaagcaccacgtgagcttgcc
gatttggcgacctctcgcctgcaggtcactgccaccgcagtccgcgcagcgctcgaccgc
gccaacggcaaccgcgccctcgctgcacaggcactcggcgtctcgcgcaccacgttgtgg
cgctggatgcaggcacaggcgtcggcgcgtacgtaa
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